Panthera leo (lion): 122214811
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Entry
122214811 CDS
T10741
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
plez Panthera leo (lion)
Pathway
plez04151
PI3K-Akt signaling pathway
plez04510
Focal adhesion
plez04512
ECM-receptor interaction
plez04820
Cytoskeleton in muscle cells
plez04974
Protein digestion and absorption
plez05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
122214811 (COL9A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122214811 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122214811 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122214811 (COL9A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
122214811 (COL9A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
122214811 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
plez00535
]
122214811 (COL9A3)
Proteoglycans [BR:
plez00535
]
Extracellular matrix (ECM) proteoglycans
Others
122214811 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
122214811
NCBI-ProteinID:
XP_042785991
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Position
A3:complement(1305807..1322237)
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AA seq
678 aa
AA seq
DB search
MAGAPTLALLLLGQLLAATVTEAQKVGPQGPPGPQGPPGKPGKDGIDGEVGPPGLPGSPG
PKGAPGKPGKPGEAGLPGLPGVDGLTGQDGPPGPKGAPGERGSLGPPGPPGLGGKGLPGP
PGEAGVSGIPGGAGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPAICPPGP
PGPPGMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGPAGIPGTVGLQGPRGLRGLPGPAGP
PGDRGPIGFRGPLGIPGAPGKVGDRGERGPDGFRGPKGDLGRPGPKGAPGVAGPGGEPGM
PGKDGRDGVPGLDGEKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGELGRAGELGEAGP
SGEPGIPGDVGVPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGRKGDTGDPGLPGPQGL
RGVTGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPGGPVGPKGESGSRGELGPKGIPGP
NGTSGVDGVPGPPGPVGFQGVQGVPGITGKPGVPGREASEQHIRELCGAMLSEQIAQLAA
HLRKPLAPGSAGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGTQGDRG
DKGSAGAGLDGPDGDQGLQGTCAGRCRLCFQLCAGRAWATNGLLKERVLSWQTLLEGQEL
SESLCGTAYSRTHSGESI
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcccccaccctggccctgctcctgctcgggcagctcctggccgcgaccgtg
accgaggcgcagaaagtgggaccccaaggccccccgggcccccaagggccacctgggaaa
ccgggcaaggacggcattgatggagaagttgggcctccgggtctgccagggtccccggga
ccaaaaggggccccagggaagccagggaaaccaggggaggctgggctcccaggactgccc
ggcgtggacggtctgacaggacaggacggaccaccgggccccaagggcgcacctggagaa
cggggaagtctgggccccccggggccccccgggctggggggcaaaggcctccccggaccc
ccgggagaggcaggagtgagtggcatccctggtggagctggcctccggggccccccggga
ccctctggactaccgggcctccctggccccccgggacctcctggaccccctggtcaccca
ggggtcctccctgaaggcgccactgacctgcagtgcccggccatctgccccccaggccct
cccgggcccccaggaatgccagggttcaaggggcccaccggctacaaaggggagcaagga
gaggtcggcaaggatggcgagaagggtgatcctgggccccccgggccggctggcatccca
ggcactgtagggctgcaggggcctcggggacttcgaggtctgccggggccggccgggccc
cccggggatcggggtcccatcggattccgagggccgctggggatcccaggagcccctggg
aaagtgggtgacagaggcgagaggggcccagacgggttccgtggccccaagggtgacctt
ggcagacctggtcccaaaggagcccctggagtggccgggccgggcggagagccgggtatg
ccgggcaaggatgggcgggacggcgtgcccggactcgatggcgagaagggagaggccggt
cgcaacggtgccccaggagagaagggtcccaacgggctgccgggcctccccggacgagca
gggtccaagggcgagaagggagaactgggccgagccggggagctgggtgaggccggaccc
tcgggagagcctggcatcccgggagacgttggcgtgcctggggagcgcggtgaggctggc
cacaggggctcggcgggggctctgggcccgcaaggccctcctggagcccctggcgtccga
ggcttccagggccggaagggcgacacaggagaccccggcctgccgggcccccagggcctc
cgaggtgtcacgggtgaccggggccccggaggagccgcaggcccgaagggagaccagggc
attgcaggttctgacggccttcctggggacaaaggagagctgggtcccggtggtcccgtc
ggtcccaaaggagagtccggcagtcgaggggagctgggcccgaagggcatcccgggcccc
aacggcaccagcggcgtggatggtgtcccaggcccgcccggccccgtgggtttccagggc
gtccaaggcgtgcctggcatcactgggaagcccggagtcccggggcgagaggccagcgag
cagcacatccgggagctgtgtggggcgatgctcagcgaacaaattgcccagttagcagct
cacctgaggaagcctttagcgccgggatccgcgggccggcctggtccagccggaccccca
ggtcccccggggccccccggctccatcggccaccccggtgcgcgagggccccctggatat
cgtggtcccaccggagagctgggagaccctgggcccagagggacccagggagaccgagga
gacaaaggctcggcgggcgcgggtctggacgggcctgacggagaccagggactccaaggt
acgtgtgccggccgctgtcggctttgcttccaactctgcgcggggcgtgcttgggcgacg
aacggccttctaaaggaacgagttctctcttggcaaactctcttagaaggtcaggaactg
tctgaatcactttgtggaaccgcttactcgagaacccattcaggagaatctatttag
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