Pantoea ananatis LMG 5342: PANA5342_0149
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Entry
PANA5342_0149 CDS
T01728
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
plf
Pantoea ananatis LMG 5342
Pathway
plf00540
Lipopolysaccharide biosynthesis
plf01100
Metabolic pathways
plf01250
Biosynthesis of nucleotide sugars
Module
plf_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PANA5342_0149 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
plf01005
]
PANA5342_0149 (rfaD)
Enzymes [BR:
plf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
PANA5342_0149 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
plf01005
]
Core region
PANA5342_0149 (rfaD)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
KR
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
CCF07542
LinkDB
All DBs
Position
complement(164582..165514)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGMIGSNIVKTLNDRGHNDILVVDNLKDGTKFVNLADLDIADYMDKEEFLTYI
MSGEDLGPIEAVFHEGACSATTEWDGKYMMDNNYQYSKDLLHFCLEREIPFLYASSAATY
GGRNENFIEERQYEQPLNVYGYSKMLFDHYVRQILPEASSPVCGFRYFNVYGPRESHKGS
MASVAFHLNTQISNDENPKLFEGSDGFKRDFIHVDDVVSVNLWCWENGISGIYNCGTGRA
ESFQEVADAVLNFHQKGQIEYIPFPDKLKGRYQAYTQADLSNLRAAGYDKPFKTVAQGVS
EYMVWLNRNV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaaccggtggcgcaggaatgatcggcagcaatattgtcaaaacgctgaac
gatcgcggtcacaacgacattctggtcgtggataaccttaaagatggcaccaagttcgtg
aatctggccgatctggatatcgctgattacatggataaagaagaattcctgacctatatc
atgtcaggtgaagatcttggtccgattgaagccgtttttcacgaaggtgcctgctcagcc
accaccgagtgggacggtaagtacatgatggataataactatcagtactctaaagatctg
ctgcacttctgtcttgagcgtgaaattccgttcctttacgcttcttctgccgccacctat
ggtggacgcaatgagaatttcattgaagagcgccagtacgaacagccactgaatgtctac
ggctattcaaaaatgctgttcgaccactacgtgcgtcagatcctgcctgaagcctcctcg
ccggtatgcggctttcgctactttaacgtttacggcccgcgtgaaagccataaaggcagc
atggcaagcgtggcgtttcatttaaacacgcagattagcaatgatgaaaatccaaagctg
tttgaaggcagcgacggctttaaacgtgattttattcatgtcgatgatgtggtgtcggtg
aatctgtggtgctgggagaatgggatttccggcatctataactgcggaacaggccgcgcc
gaatccttccaggaagtggcagatgcggtgcttaattttcaccagaaaggccagattgag
tacattcctttccctgacaagctgaaaggccgctaccaggcttacacgcaggccgacctg
tctaatttacgcgcagcgggttacgacaaaccgtttaagaccgtggcacagggcgtttct
gaatatatggtttggttaaatcgcaacgtctaa
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