Pantoea ananatis LMG 5342: PANA5342_4262
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Entry
PANA5342_4262 CDS
T01728
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
plf
Pantoea ananatis LMG 5342
Pathway
plf00300
Lysine biosynthesis
plf00470
D-Amino acid metabolism
plf01100
Metabolic pathways
plf01110
Biosynthesis of secondary metabolites
plf01120
Microbial metabolism in diverse environments
plf01230
Biosynthesis of amino acids
Module
plf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PANA5342_4262 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PANA5342_4262 (dapF)
Enzymes [BR:
plf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PANA5342_4262 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
CCF11655
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Position
complement(4512551..4513375)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLSDRHLGIGFDQLLVVEPPYDPDLDFHY
RIFNADGSEVAQCGNGARCFARFVQLKGLTNKSDIRVSTQAGRMVLSVTPDDLVRVNMGE
PNFEPQQVPFRANKAENLYLLRVAEQTVMFGAVSMGNPHCVIQVESTKTAQVELLGPVLE
SHERFPERVNVGFMEIISPEHIRLRVYERGAGETQACGSGACAAVACGIQQGILSQKVRV
DLPGGTLHIAWKGVGQPLYMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcacggtctcggcaatgatttcatggttgtggatgccgtaacg
caaaatgtctttttttcgccggaattgatccgccggctgtccgatcgccatctcgggatt
ggcttcgatcagctgctggtcgttgagccgccttacgatcccgatctcgactttcactac
cgcatttttaatgcagacgggagtgaagtcgcgcagtgtgggaatggcgcccgctgcttc
gcccgttttgttcagttaaaagggctgacgaataaaagcgatattcgcgtgagcacccag
gctggtcgtatggttctgagcgttacaccagacgatctggtacgtgtgaatatgggcgag
ccgaatttcgaaccccagcaggtgccttttcgcgccaataaagctgaaaacctttacctg
ttacgcgtggcggaacaaacggtgatgtttggtgccgtctccatgggcaaccctcactgc
gtaatccaagtggaaagcacgaaaacggcccaggttgagcttctgggaccggtcctggaa
agccatgagcgttttccggagcgcgtcaacgtgggctttatggaaattatcagccctgaa
cacatccggctgcgtgtttatgaacgcggtgcaggggaaacccaggcgtgcggtagcggt
gcctgtgcggcggttgcctgcggtatccagcagggtattttaagtcagaaagtacgcgtt
gatttgccaggcggcacgttacatatcgcctggaaaggcgtcggacagccgctctacatg
accggtccggccacacatgtctacgatgggtttattcacttatga
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