Planctomyces sp. SH-PL62: VT85_06075
Help
Entry
VT85_06075 CDS
T04401
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh00541
Biosynthesis of various nucleotide sugars
plh01100
Metabolic pathways
plh01250
Biosynthesis of nucleotide sugars
Module
plh_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
VT85_06075 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
plh01005
]
VT85_06075 (kdsB)
Enzymes [BR:
plh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
VT85_06075 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
plh01005
]
Lipid A
VT85_06075 (kdsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
IspD
Motif
Other DBs
NCBI-ProteinID:
AMV36979
LinkDB
All DBs
Position
complement(1553570..1554328)
Genome browser
AA seq
252 aa
AA seq
DB search
MENVAVIPARFASTRLPGKPLLSDTGKPLIQHVVEAAKRARSLQRVIVATDDERIADAVR
GFGGEVAMTRADHATGTDRVAEVAAAIPTAAIIVNVQGDEPEIDGSSIDRLIALLRDDPE
APMATLATPIRDEAVYRDPSCVKVVASKRGRALYFSRSPIPFHRDAAPDFADPAAPAAFL
HLGLYAYRRDFLLRVGDLPRSPLESAEKLEQLRVLEAGLPIALGIVDEPSIGIDTPEDYR
RFVERHRRAHPA
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgtggccgtgatcccggcgcggttcgcttcgacccgactgcccggcaaaccc
cttctatccgacaccggaaagcccttgatccagcacgtggtcgaggccgcgaaacgcgcg
cgatcgctgcaacgcgtcatcgtcgccaccgacgacgaacgcatcgccgacgccgtccgc
ggcttcggcggcgaagtcgccatgacccgcgccgaccatgcgacgggcaccgaccgcgtg
gccgaggtcgccgctgcgatccccaccgccgcgatcatcgtcaacgtccagggagacgaa
cctgagatcgacggatcttcaattgatcgcctgatcgcgctcctgcgggacgaccccgag
gcgccgatggccaccctcgccaccccgatccgcgacgaggccgtctaccgcgacccctcg
tgcgtcaaggtcgtggcctcgaagcgcggccgcgccctctacttctcgcgcagcccgatc
cccttccaccgcgacgccgcgccggacttcgccgacccggccgcccccgcggcgttcctc
cacctgggcctctacgcctaccgccgcgacttcctcctgcgcgtcggcgacctcccgcgg
tcgccgctggaatcggccgagaagctcgaacagctccgcgtcctcgaggccggcctcccc
atcgcgctcgggatcgtcgacgagccgagcatcggcatcgacacccccgaggactatcgc
cgcttcgtcgagcggcatcgccgcgcccatccggcctga
DBGET
integrated database retrieval system
