Planococcus versutus: I858_013535
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Entry
I858_013535 CDS
T04421
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
pll
Planococcus versutus
Pathway
pll03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I858_013535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pll03019
]
I858_013535
Messenger RNA biogenesis [BR:
pll03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I858_013535
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
KH_2
KH_NusA_2nd
ZapG-like
Gly_zipper
YtxH
Motif
Other DBs
NCBI-ProteinID:
ANU28010
UniProt:
A0A1B1S486
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Position
complement(2049326..2050882)
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AA seq
518 aa
AA seq
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MDNVIIFTLLGIIVGVVVGYFVMKKSNESKMAGARNSAEQIIEDAKREAEAQKKEALLEA
KDENHKLRTETESDIRERRLEFQKQENRLSQREENLDRKDDALNKREAGLERKDETLSEK
QQHIEQMESKAEELVRQQQSEMERISSLTREEAKSIILQDVEKELSTDIAVMMKESEARA
KEESDKKAKNILSLAMQRFAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTGI
DLIIDDTPEAVILSGFDPIRRETARLALEKLVSDGRIHPARIEEMVEKSRREVDEQIREI
GEQTTFDVGIHNLHPDLIKILGRLRYRTSYGQNVLKHSVEVAFLSGLMAAELGEDVTLAR
RAGLLHDIGKAIDHEVEGSHVEIGVELGTKYKEHPVVINSIASHHGDTEATSIISVIVAA
ADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREIRIMVRPEQIDDM
TAHRLARDIRKRIEEELNYPGHIKVTVIRETRAVEYAK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggataacgtgatcatcttcactttgcttggtatcatcgtcggtgtagttgttggttat
tttgtaatgaaaaaatcaaatgagtccaaaatggcaggtgcgagaaactctgcagagcag
atcatcgaagatgcaaagagagaagccgaagcgcagaaaaaagaagcccttttggaagca
aaagacgaaaatcacaaattgcgtactgaaacagaatctgatattcgagaacgccgatta
gaatttcaaaaacaagaaaatcggttgtcccagagagaagaaaatttagatcgcaaggat
gatgcattaaacaaaagagaagcaggtctagaacgtaaagacgaaacgctctcagaaaaa
caacagcatattgaacagatggagagcaaagccgaagaactagttcgacagcagcaatct
gaaatggaacgcatttcatctttgacacgcgaagaagcgaaatcaatcatcttacaggat
gttgaaaaagaactttcaacggacattgcggtaatgatgaaagagtcggaagctcgcgcc
aaagaagaatcggacaaaaaagcgaaaaacattttgtcattggcgatgcaacgttttgct
gcagaccatgtagcagaaactacagtatctgtagtcaatctaccaaacgacgaaatgaaa
gggcgtatcattgggcgtgaaggacgtaatatccggacgcttgaaactttaacaggtatc
gatttaattatcgacgatacaccagaagcggttattttgtcaggattcgatccgattcgt
cgcgaaacagcacgattggcacttgaaaaactggtatctgatggccgtattcaccctgcg
cgtattgaagaaatggttgagaagtcaagacgtgaagtggatgaacaaattcgtgaaatt
ggtgaacaaacgacatttgacgtaggcatacacaatttacatcctgatttgatcaaaatt
cttggacgccttcgctaccgtacaagttacggacaaaatgtactgaagcattctgtggaa
gtggcattcttgtcaggcttgatggcagcagagctaggagaagacgtaacgttagcacgt
cgtgcgggtcttcttcatgatatcggtaaagcaattgaccatgaagttgaaggtagccac
gtagaaattggcgtggaacttggtacgaaatataaagaacatccagtggttattaacagt
attgcttctcaccacggtgatacagaagcaacttcaattatttcagttattgtggcagca
gcagatgcattgtctgccgctcgtccaggagcaagaagtgaaacattggaaaactatatt
cgccgcttagaaaaacttgaagaaatttcagagtcgtatgaaggcgttgagaagtcattc
gctattcaagcgggacgtgaaattcgcatcatggtgcgacctgaacaaattgatgacatg
acagcacatcgtttggctcgcgatatccggaaacggattgaagaagagctgaattatcca
ggtcatatcaaagtgacggttattagagaaactagagcagttgaatacgcaaaataa
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