Planctopirus limnophila: Plim_3397
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Entry
Plim_3397 CDS
T01225
Name
(GenBank) 4-amino-4-deoxy-L-arabinose transferase-like glycosyltransferase of PMT family
KO
K00728
dolichyl-phosphate-mannose-protein mannosyltransferase [EC:
2.4.1.109
]
Organism
plm
Planctopirus limnophila
Pathway
plm00514
Other types of O-glycan biosynthesis
plm00515
Mannose type O-glycan biosynthesis
plm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
Plim_3397
00514 Other types of O-glycan biosynthesis
Plim_3397
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
plm01003
]
Plim_3397
Enzymes [BR:
plm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.109 dolichyl-phosphate-mannose---protein mannosyltransferase
Plim_3397
Glycosyltransferases [BR:
plm01003
]
O-Glycan biosynthesis
O-linked Man type
Plim_3397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMT_2
Motif
Other DBs
NCBI-ProteinID:
ADG69210
UniProt:
D5SUF7
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All DBs
Position
4392788..4394611
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AA seq
607 aa
AA seq
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MNPRQESKPAKRPVRSAGDKPAPGMLSKLAQLTPAFWLVIGLATVIRCWGIWNQSVEHFD
EGVYASNIWFGPDQGYEYPARFFYAPPLWPLVLEWTQLIGAMLGLGHPGWLVMLPGILCG
IALCGVIYSFGKEFFCEQVGLIAGLMAACSDLLASYSRTGLTDIPVTLCMLLAVRAMIRS
LTTPAQKNFPWGSIFAAGGWTALGWSIKYSGWLPLAILLAAEFAGWILKCHVLPAARVQK
MTVSICAIAVVLWLPVLWGLQATGGYAAVSANHAQYVTGLGQWFTQFQNQWETIRHYSTY
FSLALLASCIVAAGYLRVGGLTILHCNWLLLFCVLALGTGDLTIWMIGGFIGAYWGLMQP
KFAAVESEIPEIRMTQAVAPIEVTRIAVLFLLTWMTGLLLSIPMYRSYPRLLTPILPPAF
LLFSYGYHRYIATRTNIYLNQGVLIGKMLSRAKQLLVLAPLLLLGSFSPLLKKQEFPFHA
WQDRTAMLETSRTFLQTVRRQTPSGKPAIIYVYGEPAIFWQLRAQGFVLTGPVQDLRFIE
RDSPAEVWLVVGPHARRNSQFLEAWKQSGMLFTKENESSVRVSDIVRRDDESKEETALFE
LYRLHPP
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccgcgtcaagagagcaagcctgcaaaacgccccgtccgctcagcgggcgacaaa
ccagcacccggtatgttgtcgaagctggcacagctcacgccggctttctggctggtgatt
ggcctcgccacagtgattcgatgctggggaatatggaatcaaagcgtcgaacactttgat
gaaggagtttacgcttcgaacatctggttcgggcctgaccagggttacgaatatccggcc
cggtttttctatgcgcccccactctggccattggtgctcgaatggacacaactgatcggt
gccatgctgggccttgggcatcccggttggttggtcatgctgccgggcattctttgcggt
attgccctgtgtggagtgatttactcttttggcaaagagtttttctgtgagcaagtgggt
ttgatcgcgggattgatggccgcctgttcggatctgctggcaagttactcacgcacaggt
ttgaccgatattcccgtgactctctgcatgttgctggcggttcgcgccatgatccgctcg
ctcactactccggcacagaaaaacttcccctggggatccatcttcgctgcgggaggctgg
accgctctcggatggagcatcaaatactcaggctggctgccactggcgattctcctggcg
gctgagtttgccggctggatcctcaaatgccatgtcctgccggctgcgcgggtgcagaag
atgaccgtcagcatttgtgcgattgccgtcgtgctgtggctccctgtgctctggggactg
caagccactggtggatatgcagccgtctcggccaatcatgcccaatatgtgacgggtctg
gggcagtggttcacgcaattccagaatcaatgggagacgattcggcactactcgacctac
ttctcgctggctctgttggcatcgtgcattgtcgctgcgggttatcttcgagttggcggg
ctcacaatcttacactgcaactggttattacttttttgcgtgttggccttgggaacaggt
gatctcaccatctggatgattggcggcttcatcggtgcttactggggactgatgcagccg
aagtttgcggcagtggaatcagaaatccccgaaattcgcatgacacaagccgtcgcaccc
atcgaagttacgaggatcgccgtcttgtttttactgacctggatgaccgggttattgctc
tcgatcccgatgtatcgatcctatccacgactgctgacaccgatcttgccaccagcgttt
ctcctgttttcgtacgggtaccatcgctacatcgccacgagaaccaatatttatctgaat
caaggagtgctgattgggaagatgctctctcgcgctaagcagcttctggtcctggcaccc
ctgctcctgctgggaagcttttcaccacttttgaagaagcaagagtttccgttccatgcg
tggcaggatcggactgcgatgctggaaacaagtcgcacattcctgcagacggttcgcagg
cagacaccttccggcaagccagcgatcatttacgtctacggtgagcccgccattttctgg
caattgcgagcgcaaggatttgtactcacaggcccggtgcaggatttaagatttattgaa
cgcgactcaccggctgaggtctggctggtcgtggggccgcacgcccgaagaaactcgcaa
tttctcgaagcgtggaagcagtcggggatgctgttcaccaaagaaaacgaatcatcagtt
cgagtaagcgatattgtgcggagagatgatgaatcaaaggaagaaacagccctcttcgag
ctgtatcgactccacccaccataa
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