Perognathus longimembris pacificus (Pacific pocket mouse): 125340076
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Entry
125340076 CDS
T08928
Symbol
Cdx1
Name
(RefSeq) homeobox protein CDX-1
KO
K09312
homeobox protein CDX1/4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125340076 (Cdx1)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
125340076 (Cdx1)
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GFIT
Motif
Pfam:
Homeodomain
Caudal_act
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
125340076
NCBI-ProteinID:
XP_048187453
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Position
22:complement(1141428..1153798)
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AA seq
252 aa
AA seq
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MYVGYVPDKDAPAYPGPAGLGLGPQAYGPPAPPQYPDFAGYAPAEPPPAPPAAWAAPFPA
PKDDWTAAYGPGPAAPAAFGPAPDFGPVPAPPGPGPGLLPQPLGAPGAPSSPRPPRRTPY
EWMRRGAAAGGGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAATLGL
TERQVKIWFQNRRAKERKVNKKKQPPPPPQQLPPVLDGAPAPAGPPLGSLCPSNAGLLGV
SSPVSVKEEFLP
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgggctatgtgccggacaaggacgcgcccgcgtaccccggccccgccggcctc
ggcctcggcccgcaggcctacgggccccccgcgcccccgcagtaccccgacttcgccggc
tacgcccccgcggagccgccccccgcgccccctgcggcctgggccgcgcccttccccgcg
cccaaggacgactggacggccgcctacggccccgggcccgcggcccccgcggccttcggg
cccgctccggacttcggccccgtgcccgcgcccccggggcccggcccgggcctcctgccg
cagcccctgggcgccccgggcgcgccgtcctcccccaggccgccgaggcggacgccctac
gagtggatgcgacgcggcgcggcggccggaggcggcggcggcagcggtaagacgcggacc
aaggacaagtaccgcgtggtctacaccgaccaccagcgcctggagctggagaaggagttc
cactacagccgctacatcaccatccggaggaagtcggagctggcggccacgctggggctc
acggagcggcaggtcaagatctggttccagaaccggcgggccaaggagcgcaaagtgaat
aagaagaagcagccgccgcccccgccccagcagctgcccccagtcctggacggcgccccc
gctccggcggggccccccctgggaagcctgtgccccagcaacgctggcctcctgggggtc
tcgtcccccgtgtctgtcaaggaagaatttctgccatag
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