Perognathus longimembris pacificus (Pacific pocket mouse): 125342716
Help
Entry
125342716 CDS
T08928
Symbol
Cacna1c
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1C
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04010
MAPK signaling pathway
plop04020
Calcium signaling pathway
plop04022
cGMP-PKG signaling pathway
plop04024
cAMP signaling pathway
plop04260
Cardiac muscle contraction
plop04261
Adrenergic signaling in cardiomyocytes
plop04270
Vascular smooth muscle contraction
plop04713
Circadian entrainment
plop04720
Long-term potentiation
plop04723
Retrograde endocannabinoid signaling
plop04724
Glutamatergic synapse
plop04725
Cholinergic synapse
plop04726
Serotonergic synapse
plop04727
GABAergic synapse
plop04728
Dopaminergic synapse
plop04742
Taste transduction
plop04911
Insulin secretion
plop04912
GnRH signaling pathway
plop04921
Oxytocin signaling pathway
plop04924
Renin secretion
plop04925
Aldosterone synthesis and secretion
plop04927
Cortisol synthesis and secretion
plop04929
GnRH secretion
plop04930
Type II diabetes mellitus
plop04934
Cushing syndrome
plop04935
Growth hormone synthesis, secretion and action
plop05010
Alzheimer disease
plop05020
Prion disease
plop05022
Pathways of neurodegeneration - multiple diseases
plop05031
Amphetamine addiction
plop05207
Chemical carcinogenesis - receptor activation
plop05410
Hypertrophic cardiomyopathy
plop05412
Arrhythmogenic right ventricular cardiomyopathy
plop05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125342716 (Cacna1c)
04020 Calcium signaling pathway
125342716 (Cacna1c)
04024 cAMP signaling pathway
125342716 (Cacna1c)
04022 cGMP-PKG signaling pathway
125342716 (Cacna1c)
09150 Organismal Systems
09152 Endocrine system
04911 Insulin secretion
125342716 (Cacna1c)
04929 GnRH secretion
125342716 (Cacna1c)
04912 GnRH signaling pathway
125342716 (Cacna1c)
04921 Oxytocin signaling pathway
125342716 (Cacna1c)
04935 Growth hormone synthesis, secretion and action
125342716 (Cacna1c)
04924 Renin secretion
125342716 (Cacna1c)
04925 Aldosterone synthesis and secretion
125342716 (Cacna1c)
04927 Cortisol synthesis and secretion
125342716 (Cacna1c)
09153 Circulatory system
04260 Cardiac muscle contraction
125342716 (Cacna1c)
04261 Adrenergic signaling in cardiomyocytes
125342716 (Cacna1c)
04270 Vascular smooth muscle contraction
125342716 (Cacna1c)
09156 Nervous system
04724 Glutamatergic synapse
125342716 (Cacna1c)
04727 GABAergic synapse
125342716 (Cacna1c)
04725 Cholinergic synapse
125342716 (Cacna1c)
04728 Dopaminergic synapse
125342716 (Cacna1c)
04726 Serotonergic synapse
125342716 (Cacna1c)
04720 Long-term potentiation
125342716 (Cacna1c)
04723 Retrograde endocannabinoid signaling
125342716 (Cacna1c)
09157 Sensory system
04742 Taste transduction
125342716 (Cacna1c)
09159 Environmental adaptation
04713 Circadian entrainment
125342716 (Cacna1c)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
125342716 (Cacna1c)
09164 Neurodegenerative disease
05010 Alzheimer disease
125342716 (Cacna1c)
05020 Prion disease
125342716 (Cacna1c)
05022 Pathways of neurodegeneration - multiple diseases
125342716 (Cacna1c)
09165 Substance dependence
05031 Amphetamine addiction
125342716 (Cacna1c)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
125342716 (Cacna1c)
05412 Arrhythmogenic right ventricular cardiomyopathy
125342716 (Cacna1c)
05414 Dilated cardiomyopathy
125342716 (Cacna1c)
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
125342716 (Cacna1c)
04934 Cushing syndrome
125342716 (Cacna1c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plop04040
]
125342716 (Cacna1c)
Ion channels [BR:
plop04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125342716 (Cacna1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
CAC1F_C
PKD_channel
Motif
Other DBs
NCBI-GeneID:
125342716
NCBI-ProteinID:
XP_048190989
LinkDB
All DBs
Position
27:8215854..8312280
Genome browser
AA seq
1903 aa
AA seq
DB search
MVPLLHIALLVLFVIIIYAIIGLELFMGKMHKTCYNQEGVADVPAEEDPSPCALETGHGR
QCQNGTVCRPGWDGPKHGITNFDNFAFAMLTVFQCITMEGWTDVLYWMQDAMGYELPWVY
FVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQA
EDIDPENEDEGLDEEKPRNRGAPASLRDQKKGKFAWFSHSTETHVSMPTSETESVNTENV
AGGDIEGENCGARLAHRISTSKFSRYWRRWNRFCRRKCRAAVKSNVFYWLVIFLVFLNTL
TIASEHYNQPHWLTEVQDTANKALLAMFTAEMLLKMYSLGLQAYFVSLFNRFDCFIVCGG
ILETILVETKIMSPLGISVLRCVRLLRIFKITRYWNSLSNLVASLLNSVRSIASLLLLLF
LFIIIFSLLGMQLFGGKFNFDEMQTRRSTFDNFPQSLLTVFQILTGEDWNSVMYDGIMAY
GGPSFPGMLVCIYFIILFICGNYILLNVFLAIAVDNLADAESLTSAQKEEEEEKERKKLA
RTASPEKKQEAVEKPVVEETKEEKIELRSITADGESPPTTKINVDELQPNENEDKSSYPN
PDTTEEDEEEPEMPVGPRPRPLSELHLKEKAVPMPEASAFFIFSSSNRFRLQCHRIVNDT
IFTNLILFFILLSSISLAAEDPVQHTSFRNHILFYFDIVFTTIFTIEIALKMTAYGAFLH
KGSFCRNYFNILDLLVVSVSLISFGIQSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQ
CVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGKLYTCSDSSKQTEEECKGNYITYKDGE
VDHPIIQPRSWENSKFDFDNVLTAMMALFTVSTFEGWPELLYRSIDSHTEDKGPIYNYRV
EISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEQEYKNCELDKNQRQCVEYALKARPLR
RYIPKNQHQYKVWYVVNSTYFEYLMFVLILLNTICLAMQHYGQSCLFKSAMNILNMLFTG
LFTVEMILKLIAFKPKGYFSDPWNVFDFLIVIGSIIDVILSETNPADHSQCSPTMNLEEN
SRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQ
VFGKIALNDTTEINRNNNFQTFPQAVLLLFRCATGEAWQDIMLACMPGKKCAPESEPGNS
TEGELPCGSSFAVFYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRI
WAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNA
TLFALVRTALRIKTEGNLEQANEELRAIIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYA
TFLIQEYFRKFKKRKEQGLVGKPSQRNALSLQAGLRTLHDIGPEIRRAISGDLTAEEELD
KAMKEAVSAASEDDIFRRAGGLFGNHVTTYYQSDSRGAFPQTFTAQRPLHINKTGNNQGD
TESPSHEKLVDSTFTPSSYSSTGSNANINNANNTALGRLPRPGGYPSTVSTVEGHGAPLA
PASHAQEGAWNVSSRRCRSRDSQLAVECPEEATQDAAYYSHVRTRNAEYGSEPNLLATEI
LPSQDDENRQLTPPEEEKRDFRQSPKRGFLRSASLGRRASFHLECLRRQKSQGGDIAQKT
VLPLHLVHHQALAVAGLSPLLQRSHSPTTFPRPCASPPAPPGAQRGWSPQPIPTLRLEGA
ESSEKLNSSFPSIHCGSWAEAAPCGGGCGVRRARPVSLTVPSQAGAPGRQLHGSASSLVE
AVLISEGLGHFAQDPKFLEVATQELADACELTAEEMDWAADSILQRGXPNGALLPFVNCR
SPVPARRAARRTRGARARRGRGRSQGEDREELAADGRGHGSSL
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccctgctccacatcgccctgctcgtgctcttcgtcatcatcatctacgccatc
atcggcctggagctgttcatggggaagatgcacaagacctgctacaaccaggagggcgtc
gcagatgtcccagcggaagaggacccctccccctgcgccctggagaccggccacgggcgg
cagtgtcagaacggaaccgtgtgcaggcctgggtgggacgggcccaagcatggcatcacc
aacttcgacaactttgccttcgccatgctgaccgtcttccagtgcatcacgatggagggc
tggaccgacgtgctctactggatgcaggacgctatgggctatgagttaccctgggtctat
tttgtcagtctggtcatctttggatcctttttcgttctaaatctggttctcggtgtgttg
agcggagagttttccaaagagagggagaaggccaaggctcggggagatttccagaagctg
cgtgagaagcagcagctggaagaggacctcaagggctacctggactggatcacgcaggca
gaagacattgaccccgagaacgaggacgagggcttggacgaggagaagccacgcaacaga
ggtgccccagccagcttgcgggatcagaagaaggggaagtttgcttggtttagtcactcc
acagagacccatgtgagcatgcccaccagtgagaccgagtcggtcaacacggaaaacgtg
gccggaggcgacatcgaaggcgagaactgcggggccaggctggcccaccggatctccacg
tccaagttcagccgctactggcgcaggtggaaccggttctgccgaaggaagtgccgggcg
gcggtcaagtccaacgtcttctactggctggtgatctttctggtgttcctcaacacactc
accatcgcctctgagcactacaaccagccccactggctcacggaggtgcaagacacggcc
aacaaggctctcctggccatgttcacggcggagatgctgctgaagatgtacagcctgggg
ctgcaggcctacttcgtgtcactgttcaaccgcttcgactgcttcatcgtgtgcgggggc
atcctggagaccatcctggtggagaccaaaatcatgtcgcccctgggcatctcggtgctg
cgctgtgtccgcctgctgaggatatttaagatcaccaggtactggaactccctgagcaac
ctggtggcgtcgctgctgaactcggtgcgctccatcgcctcgctgctcctgctgctcttc
ctcttcatcatcatcttctccctgctgggcatgcagctgttcggggggaagttcaacttc
gacgagatgcagacccgccgaagcaccttcgacaacttcccccagtccctcctcaccgtc
tttcagatcctgaccggggaggactggaattcggtgatgtatgatgggatcatggcttat
ggcggcccctcttttccagggatgttagtctgtatttacttcatcatcctcttcatctgt
ggaaattatatcctactgaatgtgttcttggccattgccgtggacaacctggctgacgcc
gagagcctcacctctgcccaaaaggaggaggaggaagagaaagagaggaagaagctggcc
aggactgccagcccagagaagaaacaagaggcggtggagaagccggtggtggaggagacc
aaggaggagaaaatcgagctgcgctccatcaccgccgatggcgagtccccacctaccacc
aagatcaacgtggatgagctccagcccaatgaaaatgaggataagagttcctaccccaac
ccagacaccacagaagaggacgaggaggagcctgagatgccagtggggccccgcccgagg
ccgctgtctgaactacacctgaaagaaaaggcagtgcccatgccggaagccagcgccttc
ttcatcttcagctccagcaacaggtttcgcctccaatgccaccgcatcgtcaacgacacg
atcttcaccaacctgatcctcttcttcatcctgctcagcagcatttccctggccgctgag
gatccggtccagcacacctccttcaggaaccatattctgttttattttgacattgttttt
actaccattttcaccattgagattgctctgaagatgactgcgtatggggctttcctgcac
aagggctctttctgccggaactacttcaacatcttggacctgctggtggtcagcgtgtcc
ctcatctccttcggcatacagtcaagtgcaatcaacgtggtaaagatcttgagagtgctg
cgtgtcctcaggcccctgagagccatcaacagggccaaggggctaaagcacgtggtccag
tgcgtgtttgtcgccatccggaccatcggcaacatcgtgattgtcaccacgctgctgcag
ttcatgttcgcctgcatcggggtgcagctcttcaagggaaagctctacacctgttccgat
agctccaagcagacagaggaagagtgcaagggcaactacatcacctacaaagacggggag
gtggaccaccccatcatccagccccgcagctgggagaacagcaagtttgactttgacaac
gtgctgacggccatgatggctctcttcaccgtctccaccttcgaggggtggccagagctg
ctgtaccgctccatcgactcccacacagaggacaaaggccccatctacaactaccgcgtg
gagatctccatcttcttcatcatctacatcatcatcatcgccttctttatgatgaacatc
ttcgtgggtttcgtcatcgtcaccttccaggagcaaggcgagcaagagtacaagaactgc
gagctggataagaaccagcgacagtgcgtggagtatgcgctcaaggcccggcccctgcgg
cggtacatccccaagaaccagcaccagtacaaggtgtggtacgtggtgaactccacctac
tttgagtacttgatgttcgtcctcatcctgctcaacaccatctgcctggccatgcagcac
tacggccagagctgcctcttcaaatccgccatgaatatcctcaacatgctcttcaccggc
ctcttcactgtggagatgatcctgaagctcatcgccttcaaacccaagggttactttagt
gatccctggaatgtttttgacttcctcatcgtgattgggagcataattgatgtcattctc
agtgaaactaatccagctgatcatagccaatgctctcccaccatgaacctggaggagaac
tctcgcatctccatcaccttcttccgcctcttccgcgtcatgcgcttggtcaagctgctg
agccgtggtgagggcatccggacgctgctgtggaccttcatcaagtccttccaggccctg
ccctacgtggctctcctcatcgtgatgctctttttcatctacgcggtgattggcatgcag
gtgttcgggaaaatcgccctgaatgacaccacagaaatcaaccgcaacaacaactttcag
acctttccccaggcggtgttgctactcttcaggtgtgccacgggcgaggcctggcaggac
atcatgctggcctgcatgccaggcaagaagtgcgccccggagtcggagccgggcaacagc
acggaaggggagctgccctgcggcagcagcttcgccgtcttctacttcatcagcttctac
atgctctgtgccttcctgatcatcaatctcttcgtggctgtcatcatggataacttcgac
tacctaacgagagactggtccatcctcggcccgcaccacctggacgagttcaaaagaatc
tgggcagagtacgaccctgaggccaagggccggatcaagcacctggacgtggtgaccctc
ctccgcaggatccagcccccgctgggcttcgggaagctgtgcccccaccgcgtggcctgc
aaacgcctggtctccatgaacatgcccttgaacagtgatgggacggtcatgttcaacgcc
accctgttcgccctggtcagaacagccctgaggatcaaaacagaagggaacctagaacaa
gccaacgaggagctgcgggctatcatcaagaagatctggaagcggaccagcatgaagctg
ctggaccaggtggtgccccctgccggcgatgacgaggtgaccgtcggcaagttctacgcc
accttcctgatccaggagtacttccggaagttcaagaagcgcaaagagcaggggctggtg
ggcaaaccctcccagcggaacgcgctgtccctgcaggccggcttgcggaccctccacgac
atcgggcctgagatccgacgggccatctccggggacctgacggccgaggaggagctggac
aaggcgatgaaggaggccgtgtccgccgcctcggaggacgacatcttcaggagggccggc
ggcctcttcggcaatcacgtcaccacctactaccaaagcgacagccggggcgccttcccc
cagacgttcacggcccagcgcccgctgcacatcaacaagacgggcaacaaccaaggggac
acggagtccccctcccacgagaagctggtggactccacgttcacgcccagcagctactcc
tccacgggctccaacgccaacatcaacaacgccaacaacacggccctgggccgcctgccg
cgccccggcggctaccccagcaccgtgagcaccgtggagggccacggcgcccccttggct
ccagccagccacgcgcaggagggggcgtggaacgtcagctccaggagatgtcgctcccgg
gacagccagctggctgtggagtgtccggaggaggccacgcaggacgccgcctactacagc
cacgtgaggacgcgcaatgccgagtacggcagtgagcccaacctgctggccacagagatc
ctgccctcccaggacgatgaaaatcgacagctcacgcctccggaggaggagaagagggac
ttccggcaatcccccaagagaggtttcctccgctccgcctcccttggtcgaagggcatcc
ttccacctggagtgtctgagacgacagaagagccaaggaggagacatcgcgcagaagacg
gtcctgccgctgcatctcgtccaccatcaggccttggccgtggcgggcctgagccccctg
ctccagagaagccattcccccaccacgttccccaggccgtgtgcctcaccccctgccccc
cccggggcacagcgaggctggtccccacaacccatccccaccctgcggctggagggggcc
gagtccagcgagaaactcaacagcagcttcccatccatccactgcggctcgtgggccgag
gccgccccgtgcggcgggggctgcggggtgcggagggcccggcccgtgtccctcacggtg
cccagccaggccggggcgcccggcagacagctccacggcagcgccagcagcctggtggag
gcggtcttgatctccgaaggactgggccattttgctcaagaccccaagttcctggaggtc
gccacgcaagaactggcggacgcgtgcgagctgaccgcggaggagatggactgggccgcg
gacagcatcctccagcgggggngccccaacggtgccctcctgcccttcgtgaactgcagg
agcccggtgccggcccggcgggcggccaggaggacccgaggggcgcgtgcccggcggggc
cgcggcagaagccagggcgaggaccgggaggagctggccgccgacggcagggggcacggc
agcagcctgtag
DBGET
integrated database retrieval system
