KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125343358
Entry
125343358         CDS       T08928                                 
Symbol
Brwd3
Name
(RefSeq) bromodomain and WD repeat-containing protein 3 isoform X1
  KO
K11798  bromodomain and WD repeat domain containing protein 1/3
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:plop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:plop04121]
    125343358 (Brwd3)
Ubiquitin system [BR:plop04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     125343358 (Brwd3)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Bromodomain WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_EML WDR55 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N ANAPC4_WD40 Beta-prop_IFT140_1st WDR90_beta-prop_4th Auxin_resp
Other DBs
NCBI-GeneID: 125343358
NCBI-ProteinID: XP_048191676
LinkDB
Position
X:54211016..54303038
AA seq 1797 aa
MAAAPTQIEAELYYLIARFLQSGPCNKSAQVLVQELEEHQLIPRRLDWEGKEHRRSFEDL
VAANAHIPPDYLLKICERIGPLLDKEIPQSVPGVQTLLGVGRQSLLRDAKDCKSTLWKGS
AFAALHRGRPPELPVNYVKPPNVVNITSARQLTGCSRFSHIFPSSAYQHIKMHKRILGHL
SSVYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIAAG
SCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTTRYLTSTGADGTICFWQWHVK
TMKFKDRPVKFTERSRPGVQISCSSFSSGGMFITTGSTDHVIRIYYLGSEIPEKIAELES
HTDKVVAVQFCNNGDSLRFVSGSRDGTARIWQYQQQEWKSIVLDMATKMNGNNLPSVEDK
VTKLKVTMVAWDRYDTTVITAVNNFLLKVWNSVTGQLLHTLSGHDDEVFVLEAHPFDQRI
ILSAGHDGNIFIWDLDRGTKIRNYFNMIEGQGHGAVFDCKFSPDGNHFACTDSHGHLLLF
GFGCSKYYEKIPDQMFFHTDYRPLIRDSNNYVLDEQTQQAPHLMPPPFLVDVDGNPHPTK
FQRLVPGRENCKDEQLIPQLGYVANGDGEVVEQVIGQQTNDQDESILDGIIRELQREQDL
RLINEGDVPHFPINRSYSVNGALRSPNMDIPSSPNIGLRRSGQIEGVRQMHNNAPRSQMA
TERDLMAWSRRVVVNELNNGVSRVQEECRTAKGDIEIGLYTVEKKKKPSYTIQRNDYQPS
YGRSLRRTQRKRQHTYQTRSNMEHNSQASCQNSGAQEVSDSSSEEDETVGTSDASIEDPV
MEWQSESSSSDSSSEYSDWTADAGINLQPPKRQTRQATRKICSSSEEENVKIEEKQKKTK
QTRKKKGGLVSMAGEPNEEWFAPQWILDTIPRRSPFVPQMGDELIYFRQGHEAYVRAVRK
AKIYSVNLQKQPWNKMDLREQEFVKIVGIKYEVGPPTLCCLKLAFLDPISGKMTGESFSI
KYHDMPDVIDFLVLHQFYNEAKERNWQIGDRFRSIIDDAWWFGTVESQQPFQPEYPDSSF
QCYSVHWDNNEREKMSPWDMEPIPEGTAFPDEVGAGVPVSPEELTALLYKPQEGEWGAHS
RDEECERVIQGINHLLSLDFASPFAVPVDLSAYPLYCTVVAYPTDLNTIRRRLENRFYRR
ISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLRFIGDQSCTDILDTYNKVKAEEL
NSTDGEEDIEMVDLDSDGPGTSSGRRVKCRGRRQSLKLNPDAWRKQCKELLSLIYEREDS
EPFRQPADSLLHPGHQEQEGESSDSVVTERQDPSLSEDNQDGIDSPMDFSTVKETLEAGN
YGSPLEFYEDVHQIFSNSKAYTSNKKSRIYGMTLRLSALFENHIKNIISEYKSAMQSQKR
RRPRYRKRLRSSSSSLSSSRAPSPKGKQKQMKLQPKTDQNTSVSYARTSSPFSSPVSDTA
EGLSLYLIDDELDGPFSSPSGYGRSGNSHDPGKAKSFRNRIAPVKQDHSSDGPLTNSDGR
EAWPGVKRKLLSASEEDESMGGEDKSKETKEKSHLSSSESGELGSSSESTCGSDSDSEST
SRTDQDYVDGDHDYSKFIQTRPKRKLRKQYTNGKRNWKMRGTGGRGRWGRWGRWSRGGRG
RGGRGRGGRGRGSSNSTRGRGRGRGGRGSSRGGGATRAKRARIADDEFDTMFSGRFSRLP
RIKTRNQGRRTVLYNDDSDNDNFVSTEDPLNLGTSRSGRVRKMTEKARVSHLMGWNY
NT seq 5394 nt   +upstreamnt  +downstreamnt
atggcggcggcacctactcagatcgaagccgagctgtattacctgattgctaggttcttg
cagtccggaccctgcaacaaatccgctcaggtgctagtgcaggagctcgaggagcatcag
ctgattccgcgccgcttagactgggaggggaaagagcaccgtagaagcttcgaggatctg
gtggcagccaatgcacacattcctccagactacctccttaaaatatgtgagcgaattggt
cccttgctagacaaggagatccctcagagtgttcctggggtacagacattgctaggtgtt
ggtcggcagtctctgttacgggatgccaaagactgtaagagtacactatggaaaggatct
gcttttgcagctctacatagaggcagacctccagaactacctgtaaattatgtgaaacct
ccaaatgtggtgaatatcacctctgccaggcagttaaccggatgtagtcgcttcagccat
attttcccttcatctgcctaccagcatattaagatgcacaagagaattctggggcactta
tcttctgtctactgtgtagcatttgaccggagtgggagaagaatttttacaggttcagat
gactgcttggtaaaaatttgggctacagatgatgggcgccttcttgctacacttcgagga
cactctgctgaaatttctgacatggctgtcaactatgaaaatacactcattgccgcaggc
agctgtgataaggttgtaagagtatggtgtcttcgaacttgtgcaccagttgcagtcctt
cagggacactcagcttctattacttccatacagttttgtccatcaactaaaggcacaacc
agatacctcacttctactggtgctgatggaacaatctgtttctggcaatggcatgtaaaa
accatgaaatttaaagatcgcccagtaaaatttactgagagatccagacccggtgttcag
atatcttgttcttccttcagttctggtggtatgttcattacgacaggtagcactgaccat
gtgattagaatatattatttgggttctgagatccctgagaaaattgctgaattagaatct
catacggacaaagttgttgctgttcagttctgtaacaatggagacagcttaagatttgtt
agtggaagcagagatggaactgcaagaatatggcagtatcagcaacaagaatggaagagt
atagtgctagatatggccactaaaatgaacgggaataatttgccatctgtagaagacaaa
gtcactaaattaaaggtgactatggttgcctgggaccgttatgataccacagtcattacc
gcagtgaacaatttccttttgaaagtgtggaattctgtcacagggcagcttcttcatact
ttatctgggcatgatgatgaagtatttgttttggaagcacacccatttgatcaaaggatc
atactttctgcgggtcatgatgggaacattttcatttgggatcttgaccgtgggaccaaa
attcggaattattttaatatgattgaaggccaaggtcatggtgcagtgtttgattgtaaa
ttctcgccagatggaaaccattttgcctgcacagattctcatggacatttgctgcttttt
ggttttggatgtagtaaatactacgagaagattccagatcagatgttcttccacacggat
tatcgacctctcatccgtgattctaataactatgtattagatgaacaaactcaacaagcc
cctcaccttatgcctcctcctttcttggtggatgttgatggaaatcctcatcctacaaaa
tttcaacggctagtaccaggacgggaaaattgcaaagatgaacagcttataccacagctg
ggttatgtggctaatggtgatggtgaggtggtagaacaggtaattggacagcaaaccaat
gaccaagatgaaagcatccttgatgggatcatcagagagctgcagagagaacaagatcta
agactaattaacgaaggagatgttccacattttccaattaatagatcctattctgttaat
ggtgctttgagaagtccaaatatggatataccttcttccccaaatattggacttcgacgt
agtggtcaaattgaaggtgtgcgacaaatgcacaacaatgctcctaggagccaaatggcc
actgaacgtgatctgatggcgtggagcagaagggtggtggtaaatgaacttaataatggg
gttagtagggtacaggaagaatgtcgaactgcaaaaggtgacatagaaattggactttat
acagtagaaaagaagaaaaagccatcttatactatccaaagaaatgattatcagcctagt
tatgggcgatctttacgaaggacacaacgcaagcgtcagcatacttatcaaacacggtct
aacatggagcacaattcacaagcatcatgccaaaattcaggtgcacaagaagtgtcagac
agctcctcagaggaagatgaaactgttggtaccagtgatgcttctatagaggatcctgtt
atggagtggcaaagtgaaagttcttccagtgattcatcaagtgaatattctgattggaca
gcagatgctggaataaatttgcagccaccaaaaagacaaaccagacaggcaacacgcaaa
atatgcagcagttcagaggaggaaaatgtgaaaatagaagaaaagcaaaagaaaactaaa
caaaccagaaagaagaaaggaggtttagtttctatggcaggtgaaccaaatgaagaatgg
tttgccccacaatggatcttggataccataccacgtcgttccccatttgttccacagatg
ggcgatgagcttatttattttaggcaaggacatgaagcttatgtgagggctgtaaggaaa
gcaaaaatatacagtgttaacttacaaaagcagccatggaacaaaatggatcttagggag
caagaatttgttaagattgtaggtataaaatatgaggttggaccacctacattatgctgt
ttgaagcttgcatttctggaccccatttctggcaaaatgactggagagtctttttccatt
aaatatcatgatatgccggatgtcattgatttccttgtactacatcagttttataatgaa
gccaaagaaagaaactggcagattggtgatagattccgaagtataatagatgatgcctgg
tggtttggaactgtggagagtcagcagccttttcaaccagaataccctgatagttctttc
cagtgttacagtgttcactgggacaataatgagagagaaaagatgagcccctgggatatg
gaaccaattccagaaggaactgcctttccagatgaagtaggtgctggtgttcctgtgtcc
ccagaagaactaactgctttgctatacaaaccccaagaaggagagtggggggctcattcc
agagatgaggagtgtgaacgggttattcaggggatcaatcatcttctctctctggatttt
gccagcccttttgctgttccagtggatctcagtgcctaccccttgtattgtactgtagtt
gcatatccaactgacctcaataccatcagacggagacttgaaaatcgcttttacaggaga
atatcagcattaatgtgggaggtgcgctatatcgagcataatgctcggactttcaatgag
ccagatagtcctatagttaaagcagccaaaattgtaacagatgtcttacttcgatttatt
ggggatcagagctgcactgatatattggatacttataataaagttaaagctgaagaacta
aacagtactgatggagaagaggatatagaaatggttgatttagattcagatggtcctggc
acttcatctggacgaagggtcaaatgccgaggtagaagacaatctttaaagttaaatcct
gatgcttggagaaaacaatgcaaagaactgttgagcctcatttatgaacgtgaagattca
gagccatttcgacagccagctgattctcttcttcacccaggccatcaagaacaagaagga
gaatcctcagactcggttgttacagaaagacaagacccttctctttctgaggataatcaa
gatggtatagactcgcctatggacttcagcactgtgaaagaaactttggaagcaggaaac
tatggtagtcctctggaattttatgaggatgttcaccaaatatttagcaactccaaagct
tatacctccaataaaaagtcaaggatctatggcatgactcttcgattatctgccttattt
gaaaaccatattaaaaatatcatctctgaatataagtcagcaatgcagagtcagaagagg
agaaggcctcggtacagaaaacgtctgagaagcagcagcagttctttgtcgagtagcaga
gctcctagtccaaaagggaaacagaagcaaatgaagttgcagcctaaaactgaccagaat
acctcagtgtcttatgccagaactagttctcctttctcatctcctgtttcagatactgct
gaaggactttcactatatctaattgatgatgaactggatgggccattttcttcaccaagt
ggatatggccgaagtggaaatagccatgacccagggaaagccaaatcatttcggaataga
attgcaccagttaaacaagatcactccagtgacggacctcttacaaatagtgatggcaga
gaagcctggccaggagtgaagagaaaactacttagtgcatcagaagaagatgaaagcatg
ggaggagaagacaaatcaaaagaaacaaaagagaaatcccatctatcctcctcagagagc
ggagagttaggatccagttcagaaagtacctgtggttctgattcggactctgaatccact
tccagaacagaccaagattatgtagacggagaccatgactatagcaaattcatacaaact
agacctaaaagaaaactcagaaaacagtataccaatggaaaaagaaactggaaaatgaga
ggcacaggaggaagaggtagatggggcagatggggtagatggagtagaggaggccgaggg
cgaggaggcagagggcgaggtggtcgaggaagagggagtagtaacagtactaggggaaga
gggagagggagagggggaagagggtcctctagaggaggaggagccaccagagccaaacga
gcacgaatcgcagatgatgaatttgataccatgttttcaggacgtttcagtagactgcct
cgaattaaaacaagaaaccaaggcaggaggactgttttatacaatgatgattctgataac
gataattttgtgtccactgaagatcctctgaatcttggtacatccaggtcaggcagagta
cgaaaaatgacagaaaaagccagggttagccatctcatgggatggaattactaa

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