Perognathus longimembris pacificus (Pacific pocket mouse): 125344045
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Entry
125344045 CDS
T08928
Name
(RefSeq) LOW QUALITY PROTEIN: crooked neck-like protein 1
KO
K12869
crooked neck
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125344045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plop03041
]
125344045
03036 Chromosome and associated proteins [BR:
plop03036
]
125344045
Spliceosome [BR:
plop03041
]
Complex B
Other components
Prp19-related factors
125344045
Complex C
125344045
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
125344045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT
HAT_Syf1_CNRKL1_C
TPR_14
Suf
TPR_19
TPR_17
TPR_CcmH_CycH
HAT_Syf1_M
Mad3_BUB1_I
TPR_12
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
125344045
NCBI-ProteinID:
XP_048192610
LinkDB
All DBs
Position
2:45987384..45990872
Genome browser
AA seq
726 aa
AA seq
DB search
MAASSSATAGKQRIPQAAKVKNKAAAPVQITAEQLLREAKERELELRPPPPAQRIADQEE
LSDYKLRRRKTFEDNLRKNRTVLRNWIKYARWEESLKEIQRARSIYERALDVDYGNIPLW
LSYAEMEMKNRQVNHARNVWERAVTTLPRVSQFWYKYTAMEEMLGNIAGARQVFERWMEW
QPEEQAWHAYINLELRYREVERARTIYQRFVLVHPHVKNWIKYARSEEKQAAFAHARQVY
ERAVEFFGEEHMDERLFVAFAKFEENQKEVERARVIYKYALDRIPKHRAQELLKNYTIFE
KKFGDRPGIEALIESKCRAKYEAEVRANPLNFDSWFDYLRLLESHAEAETVREVYERAMA
NVPPSQEKRHWKRYIYLWVRYALYEELEAKDPDRTRQVYQASLQLIPHRKFTFAKMWLYY
AKFEIRQKNVPFARRVLGTSLGKCPKNKLFKGYIELELQLREFDRCRKLYEKWLEFAPEN
CASWIQFAEVETLLGDLERARAIYELAISQPRLDMPEVLWKSYIDFEMEQEETERPRNLY
RRLLQCTQHVKVWISWARFELSTGEEGSVARCRQIYEEANQTMRNCEDKEDRLLLLESWR
SFEDEFGTVSEKDQVNKLMPKKAKKRRKVQTDYGSEAAWEEYYDYIFPEDAAANLANLKL
LAMAKHWKKQQQEKEAAEQRAHEDMKESAVPTFLQMHFVQNPNDARKLEIDLIHKVCKDP
SLGDAK
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcctcctccgccacagccgggaaacagaggattcctcaagcagccaaggtc
aaaaacaaagctgcagctcccgttcagatcactgccgagcaactgctccgagaagccaaa
gaacgagagctcgaacttcggccgcctccgcctgcacagaggatcgcggaccaggaagaa
ctcagtgactacaagctgaggagaaggaagactttcgaagacaacctcaggaaaaacagg
actgtgctgaggaactggatcaaatacgccaggtgggaagaaagtctaaaggagatccaa
agggctcggtccatctacgagcgtgctttagatgtggactatggcaacatccccctctgg
ctgagctacgcagaaatggaaatgaagaatcgccaggtcaaccatgcccggaatgtgtgg
gagcgggccgtcaccacgctgccgcgagtcagccagttctggtacaagtacacggccatg
gaggagatgctggggaacattgccggtgcccggcaggtgtttgagcgctggatggaatgg
cagcccgaggagcaagcctggcacgcctacattaacttggagctgagatacagagaggta
gagcgggcacgcaccatttatcaacgatttgttcttgtgcacccccacgtgaagaactgg
atcaaatatgcccgctccgaagagaagcaggctgcctttgcccatgcccgccaagtgtat
gagagagctgtggagttcttcggagaagaacacatggatgaacgccttttcgttgcgttt
gccaagtttgaggaaaaccagaaagaagtggagagggcccgagtcatctacaagtatgcc
ttggacagaattcccaaacaccgggcccaggagctcttgaaaaactacaccatctttgag
aagaagtttggtgacaggccgggtattgaagctctcatcgagagcaaatgcagggccaag
tatgaagcagaagtgagggctaatccgctcaatttcgattcctggtttgattacttgcgc
ctgctggaaagccacgcagaagcggaaacagtgcgagaggtttatgagagagccatggcc
aatgtcccccccagtcaggagaagaggcactggaagcgctacatctacctctgggtccgc
tatgcgctctatgaagaactggaggcaaaggatcccgacaggaccagacaggtgtatcag
gcctctttgcaattaattcctcaccgcaagttcacatttgccaaaatgtggctctattac
gcaaaatttgaaatacgacagaaaaatgtaccatttgccaggagagttttggggacttcc
ctgggcaaatgtccaaagaacaagttgttcaaaggctacatagagctggaactgcagctg
cgagaattcgacagatgccggaagctttacgagaagtggctggaatttgcacctgagaat
tgtgcctcgtggattcagtttgcggaagtagagacactccttggggatctggagagagcc
cgggcgatttatgagttagccatcagccagccacgcttagacatgccagaggtgctttgg
aaatcgtacatcgactttgaaatggagcaggaagaaacggagagaccacgaaacctttac
cgacgcttgctccagtgcacgcaacacgtcaaagtatggatcagctgggctcgctttgag
ttgtctacaggagaagaaggaagtgtggctagatgcagacagatctatgaggaggctaac
caaaccatgaggaactgtgaagacaaggaagacaggctgctgctgctggaatcttggagg
agcttcgaagatgaatttgggacagtatcagagaaggaccaagtaaacaaactcatgcca
aagaaagccaagaagagaagaaaggtccagactgactatgggtctgaggcagcctgggaa
gaatactatgactatatcttcccagaagacgcagccgccaacctagctaacctcaagctc
ctggccatggccaaacattggaagaaacaacaacaggagaaggaggctgccgagcaacgt
gctcatgaggacatgaaggagagtgcagttccaacattcctgcaaatgcactttgtccag
aaccctaatgacgcaaggaagttggaaattgatctgatccacaaggtttgcaaggacccc
tcccttggggatgccaagtga
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