Perognathus longimembris pacificus (Pacific pocket mouse): 125345326
Help
Entry
125345326 CDS
T08928
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125345326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plop03041
]
125345326
03036 Chromosome and associated proteins [BR:
plop03036
]
125345326
Spliceosome [BR:
plop03041
]
Complex B
Other components
Prp19-related factors
125345326
Complex C
125345326
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
125345326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_19
TPR_17
TPR_CcmH_CycH
TPR_16
Mad3_BUB1_I
HAT_Syf1_M
TPR_12
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
125345326
NCBI-ProteinID:
XP_048193513
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MAASSSATAGKQRIPQAAKVKNKAAAPVQITAEQLLREAKERELELRPPPPAQRIADQEE
LSDYKLRRRKTFEDNLRKNRTVLRNWIKYARWEESLKEIQRARSIYERALDVDYGNIPLW
LSYAEMEMKNRQVNHARNVWERAVTTLPRVSQFWYKYTAMEEMLGNIAGARQVFERWMEW
QPEEQAWHAYINLELRYREVERARTIYQRFVLVHPHVKNWIKYARSEEKQAAFAHARQVY
ERAVEFFGEEHMDERLFVAFAKFEENQKEVERARIIYKYALDRIPKHRAQELLKNYTIFE
KKFGDRPGIEALIESKCRAKYEAEVRANPLNFDAWFDYLRLLESHAEAETVREVYERAVA
NVPPSEEKRHWKRYIYLWVRYALYEELEAKDPDRTRQVYQASLQLIPHRKFTFAKMWLYY
AKFEIRQKNVPFARRVLGTSLGKCPKNKLFKGYIELELQLREFDRCRKLYEKWLEFAPEN
CASWIQFAEVETLLGDLERARAIYELAISQPHLDMPEVLWKSYIDFEMEQEETERPRNLY
RRLLQRTQHVKVWISWARFELSTGEEGSVARCRQIYEEANQTMRNCEDKEDRLLLLESWR
SFEDEFGTVSEKDRVNKLMPKKAKKRRKVQTDYGSEAAWEEYYDYIFPEDAAANLANLKL
LAMAKHWKKQQQEKGGCRATCS
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcctcctccgccacagccgggaaacagaggattcctcaagcagccaaggtc
aaaaacaaagctgcagctcccgttcagatcactgccgagcaactgctccgagaagccaaa
gaacgagagctcgaacttcggccgcctccgcctgcacagaggatcgcggaccaggaagaa
ctcagtgactacaagctgaggagaaggaagactttcgaagacaacctcaggaaaaacagg
actgtgctgaggaactggatcaaatacgccaggtgggaagaaagtctaaaggagatccaa
agggctcggtccatctacgagcgtgctttagatgtggactatggcaacatccccctctgg
ctgagctacgcagaaatggaaatgaagaatcgccaggtcaaccatgcccggaatgtgtgg
gagcgggccgtcaccacgctgccgcgagtcagccagttctggtacaagtacacggccatg
gaggagatgctggggaacattgccggtgcccggcaggtgtttgagcgctggatggaatgg
cagcccgaggagcaagcctggcacgcctacattaacttggagctgagatacagagaggtg
gagcgggcacgcaccatttatcaacgatttgttcttgtgcacccgcacgtgaagaactgg
atcaaatatgcccgctccgaagagaagcaggctgcctttgcccatgcccgccaagtgtat
gagagagctgtggagttcttcggagaagaacacatggatgaacgccttttcgttgcgttt
gccaagtttgaggaaaaccagaaagaagtggagagggcccgaatcatctacaagtatgcc
ttggacagaattcccaaacaccgggcccaggagctcttgaaaaactacaccatctttgag
aagaagtttggtgacaggccgggtattgaagctctcatcgagagcaaatgcagggccaag
tatgaagcagaagtgagggctaatccgctcaatttcgatgcctggtttgattacttgcgc
ctgctggaaagccacgcagaagcggaaacagtgcgagaggtttatgagagagccgtggcc
aacgtcccccccagtgaggagaagaggcactggaagcgctacatctacctctgggtccgc
tatgcgctctatgaagaactggaggcaaaggatcccgacaggaccagacaggtgtatcag
gcctctttgcaattaattcctcaccgcaagttcacatttgccaaaatgtggctctattac
gcaaaatttgaaatacgacagaaaaatgtaccatttgccaggagagttttggggacttcc
ctgggcaaatgtccaaagaacaagttgttcaaaggctacatagagctggaactgcagctg
cgagaattcgacagatgccggaagctttacgagaagtggctggaatttgcacctgagaat
tgtgcctcgtggattcagtttgcggaagtagagacactccttggggatctggagagagcc
cgggcgatttatgagttagccatcagccagccacacttagacatgccagaggtgctttgg
aaatcgtacatcgactttgaaatggagcaggaagaaacggagagaccacgaaacctttac
cgacgcttgctccagcgcacgcaacacgtcaaagtatggatcagctgggctcgctttgag
ttgtctacaggagaagaaggaagtgtggctagatgcagacagatctatgaggaggctaac
caaaccatgaggaactgtgaagacaaggaagacaggctgctgctgctggaatcttggagg
agcttcgaagatgaatttgggacagtatcagagaaggaccgagtaaacaaactcatgcca
aagaaagccaagaagagaagaaaggtccagactgactatgggtctgaggcagcctgggaa
gaatactatgactatatcttcccagaagatgcagccgccaacctagctaacctcaagctc
ctggccatggccaaacattggaagaaacaacaacaggagaaaggaggctgccgagcaacg
tgctcatga
DBGET
integrated database retrieval system
