Perognathus longimembris pacificus (Pacific pocket mouse): 125349152
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Entry
125349152 CDS
T08928
Symbol
Setd1b
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00310
Lysine degradation
plop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125349152 (Setd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125349152 (Setd1b)
Enzymes [BR:
plop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
125349152 (Setd1b)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
125349152 (Setd1b)
HMT complexes
COMPASS/SET1 complex
125349152 (Setd1b)
COMPASS/SET1 complex (yeast)
125349152 (Setd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
N-SET
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
125349152
NCBI-ProteinID:
XP_048198960
LinkDB
All DBs
Position
3:86720955..86741311
Genome browser
AA seq
1994 aa
AA seq
DB search
MENSHPPHHHQQPPPQPGPSGERRNHHWRSYKLMIDPALKKGHHKLYRYDGQHFSLAMSS
NRPVEIVEDPRVVGIWTKNKELELSVPKFKIDEFYVGPVPPKQVTFAKLNDNIRENFLRD
MCKKYGEVEEVEILYNPKTKKHLGIAKVVFATVRGAKEAVQHLHSTSVMGNTIHVELDTK
GETRMRFYELLVTGRYTPQTLPVGELDAVSPLVNETLQLSDALKRLKDGTLSAGCGSGSS
SVTPNSGGTPFSQDTAYSSCRLDTPNSYGQGTPLTPRLGTPFSQDSSYSSRQPTPSYLFS
QDPTTTFKPRRHDSKFTDAYNRRHEHHYVHNSSAVAGAPAPFRGSSDLPFGPMGGSGGTG
GPPFKAQPQDPAAFAHTPPPAQAASAPGFKSAFSPYQTPAPPFPPPPEEPTPAAFGVHDG
GDFRRAPAPPPLPPSEPLAKEKPGTPPGPPPPDTNSMELGGRPTFGWSPEPCDSPGTPTL
ESSPAGPEKPHDSLDSRIEMLLKEQRTKLPFLREQDSDTELQMEGSPISSSSSQLSPLAP
FSTNSQLGFRGPTPPSSRPSSTGLEDISPTPLPDSDEDEELDLGLGPRPPPEPGPPDPAT
LLGQTAEAALDLAGDRTPISEKMDEGQPSSGEDMEISDDEMPSAPITSADCPKPMVVTPG
AAAVAGPNVLAPNLPLPPPPGFPPLPPPPPPPPPQPGFPMPPPLPPPPPPPPPSHPAVTV
PPPPLPAPPGVPPPPILPPLPPFPPGLFPVMQVDMSHVLGSQWGGMPMSFQMQTQMLSRL
MTGQGACPYPPFMAAAAAAASAGLQFVNLPPYRGPFSLNNSGPGRGQPWPPLPKFDPSVP
PPGYVPRQEDPHKATVDGVLLVVLKELKAIMKRDLNRKMVEVVAFRAFDEWWDKKERMAK
ASLTPVKSGEHKDEDRPKPKDRIASCLLESWGKGEGLGYEGLGLGIGLRGAIRLPSFKVK
RKEPPDAASSGDQKRLRPSTSVDEEDEESERERDRDMADAPCELAKRDPKGVGVRRRPAR
PLELDSGGEEDEKESLSASSSSSASSSSGSSSTSPSSSASEKEEEQESTEEEEEEEEEEE
EDGGEADEEEEEDRRSQISSSSSTSSTSDKDEDDEDSDARDESDNEDQDTALSEASGKDR
RDSDGEETVSVGSSRATANSSSESSEASEFESSSSSESESESSSSEDEEEMATGKEDEEE
EEGEEEEEEEEAEEEEEEEEAEEEEEVVAPATAAVTEENMAPAEAKDLEQDGAEAPLSTP
GAPVVEPAGTEEEVDIEAEDEALRDQTPIQEEPPLPVGAEEPGGCQELPEEPGLSQEEAM
LLSPELSPTRDTEAQPSLSPEHVSEDALDAEPERPPMPALAPQPPLPPPQPPRPPSPPPE
PEAPRPPPPPAPLEPPEDPPPRTPGLAKSQSTETVPATPEPLSGGSGGLSLSSPPVPGSP
FSYPSPSPGLSGGGLPRTPGRDFSFPPAFPEPGAPLLLPVCPLPAGRREERVRPLASPLA
SPVLLEAGLPLPLPLPLPLPLALPVPVLRAPARAPPTLPPLLPAPLAPCPPPIKRKPGRP
RRSPPSVLALDGTTLGRDLLLLPGQPQTPLFPGAARDPRALTLDFRNTGVPAPPPPPPPP
PPLPAEPPKLPFKELDNQWPSEAIPPGPRGRDDGNAEGLLDPAKARVPWRRPPRKRPEDP
GIPAASPPECSPPPPPFRPRSEFEEMTILYDIWNGGIDDEDVRFLCVTYERLLQQDNGMD
WLNDTLWVYHPSTSLSSAKKKKRDDGMREHVTGCARSEGFYTIDKKDKLRYLNSSRASTD
EPPADTQGMSIPAQPHASTRAGSERRSEQRRLLSSFTGSCDSDLLKFNQLKFRKKKLKFC
KSHIHDWGLFAMEPIAADEMVIEYVGQNIRQVIADMREKRYEDEGIGSSYMFRVDHDTII
DATKCGNFARFINHSCNPNCYAKVITVESQKKIVIYSKQHINVNEEITYDYKFPIEDVKI
PCLCGSENCRGTLN
NT seq
5985 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagccaccccccccaccaccaccagcagcccccgccgcagcccggcccttcg
ggcgagaggaggaaccaccattggagaagttacaagttgatgattgacccggctctgaag
aaggggcaccataaactgtaccgctacgatgggcagcatttcagcctggcgatgtccagc
aaccgcccggtggagatcgtcgaagatccccgggtcgttgggatctggaccaaaaacaag
gagttggagctgtcggtgcccaaattcaagatcgatgagttctacgtgggcccagtgcct
cccaagcaggtgacatttgccaagctgaatgacaacatccgggaaaacttcctgcgggac
atgtgcaagaagtatggggaggtggaggaggtggagattttgtacaaccccaagaccaag
aagcacctgggcattgccaaggtggtctttgccacagtcaggggagccaaggaggctgtc
cagcacctgcatagcacttctgtcatgggcaacaccatccacgtggagctggacaccaaa
ggtgaaactcgcatgcgcttctatgagctgctggtcactggcagatacaccccccagacc
ctccctgtgggtgagctggatgctgtatctccactggtgaatgagaccctgcagctgtca
gatgccctgaagcgcctcaaagatggcaccctgtctgcaggctgtggctcaggctcatcc
tctgtcacccccaatagtggcgggacccctttctcccaggacacagcctactccagctgc
cgcctggacacgcccaattcctacggacagggcacgccgctcacaccccgcctgggtacc
cccttctcacaggactccagctactccagccgccagcccacaccctcctacctcttcagc
caggaccctaccaccaccttcaagccgcggcgccacgacagcaagttcaccgatgcctac
aaccgccgccacgagcatcattacgtccacaattcctctgcagtggcaggcgccccggct
cccttccggggctcctcggacctgccctttgggcccatgggtggcagcggcggcaccggg
ggccctcccttcaaggcccagccgcaggatcctgctgcattcgcgcacactcctccgcct
gcccaagcagcctctgcgcctggattcaaatccgctttctctccataccagaccccagcg
ccccccttccccccgcccccagaggagcccacccccgctgcatttggggtccacgatggc
ggggacttccggagggcacctgcgcccccacccctgccgccctctgagcccttggccaag
gagaagccgggcaccccgccgggcccaccgcccccggacaccaacagcatggagctgggt
ggcaggcccacctttggctggagccccgagccctgcgacagcccgggcacgcccacccta
gagtcgtcgcccgcgggcccggagaagccccatgacagcctggactcgcgaatcgagatg
ctgctgaaggagcagcgcaccaagttgcccttcctgcgtgagcaggactcggacacggag
ctgcagatggagggaagccccatctcctcctcctcctcccagctctccccgctcgccccc
ttcagcaccaactcccagctgggcttccgaggccccaccccgccctcctcacgcccctcc
agcacgggcctagaagacatcagcccaacaccactgccggactccgatgaggacgaagag
ctggacctgggtctgggcccgcgacccccaccagagccaggccccccagaccctgccact
ctactgggccagactgccgaggcagccttggacctggctggagacagaacccccatctca
gagaagatggatgagggtcagccctcctctggtgaggacatggagatctcggatgatgag
atgccctccgctccgatcaccagcgccgactgccccaagcccatggtggtgacgccaggg
gcagcagctgtggcaggccctaatgtgctggcccccaatttgccactgcccccaccacct
ggcttcccaccgctgcctccacccccccctccacctccaccccaaccaggcttccccatg
cccccccctctgcccccacccccacccccaccccctccatcccaccctgctgtgacagtg
cccccaccacccctgccagcaccacctggcgtcccgcccccacccatcctgccaccattg
ccacccttccctccaggactgtttcctgtgatgcaagtggacatgagccacgtgctgggc
agccagtggggtggcatgcccatgtccttccagatgcagacacagatgctgagcagactg
atgactggccagggtgcttgcccgtacccacccttcatggcagcagcggctgcggccgct
tcagctgggctacagtttgtcaacttgccgccctaccggggccctttctccctgaacaac
agtggcccaggccgcgggcagccctggccacccctgcccaagtttgacccatcagtgcca
ccaccaggctatgtgccacggcaggaggacccacacaaggccacggtggatggcgtcctg
ctggtggtacttaaggagctcaaggccatcatgaaacgtgatctgaaccgcaagatggtg
gaggtggtagccttccgggcctttgacgaatggtgggacaagaaggagaggatggccaag
gcctcgctgacccccgtgaagtcaggagaacacaaggatgaggaccggccaaagcccaag
gaccgaattgcctcctgcttgctggagtcctggggcaagggcgagggcctgggctatgag
ggcctgggcctgggcattgggctgcgaggggccattcgcctgccctccttcaaggtcaag
agaaaggaaccacccgatgcagcctcctctggtgaccagaaacggctgcggccctccaca
tccgtagatgaggaagacgaagagtcagagcgcgagcgggaccgagacatggcggatgcc
ccctgcgagcttgccaagagggaccccaagggcgtgggtgtgcggcgccggccggctcgg
cccctggagctggacagcggcggggaagaggacgagaaggagtccctgtcagcgtcctca
tcctcgtcggcatcctcatcctcagggtcctcctccacgtccccttcctcctctgcctct
gagaaggaggaggagcaggaaagcacagaggaggaggaggaggaggaggaagaggaggag
gaggatgggggcgaagcagatgaggaggaggaagaagaccgcaggagtcagatctcctcc
tcctcctccacctcctccacctccgataaggatgaagatgatgaagacagcgatgcacgg
gatgagtctgacaatgaagatcaggatacggccctgtcagaggcgagcgggaaagacaga
agggattcggatggagaggagacggtgagcgtgggcagctccagggccacagccaactcg
tccagcgagagctctgaggcttctgagtttgagtcaagctccagttccgagtctgagtct
gaatcttcgtcctcggaggatgaagaggagatggccacggggaaagaggacgaggaagaa
gaggaaggggaggaggaggaggaggaggaggaagcggaggaggaggaggaggaggaggag
gcagaggaggaggaggaagtggtggccccggcaacagcagcagtgacagaggagaacatg
gctcctgcagaggccaaggaccttgagcaggatggggcagaggcacctctgagcacccca
ggggcgcctgtggtggagccggcaggcacagaagaggaggtggacattgaggctgaggat
gaagccctccgggaccagacccccattcaagaggagccccccttacctgtgggtgctgag
gagcctggggggtgccaggaactcccggaagagccaggcctaagccaggaagaggccatg
ttgctgtctccagagctatctcctaccagagatacggaggctcagccctccttgtccccg
gaacacgtttcagaggacgccctggatgcagagccggagcgccctccgatgccggccctg
gccccccagcctccgctgccacccccccagccaccccggccccccagcccgccgcctgag
cccgaggccccgcggcctccgccgccccctgccccgctggagccccccgaggacccgccc
cctcgcacaccgggcctcgccaagtcccagagcacagagacggtgcccgccacgccggag
cccctgtcggggggcagcggggggctgtcactcagctctccaccggtgcctggtagcccc
ttctcctacccgtccccgtccccaggcctgagtggcggtggcctcccgcggactccgggc
cgggacttcagcttcccgcccgccttccccgagcctggggcgcctctgttgctgcccgtg
tgtccgctgcctgccggccggcgcgaagagcgcgtgcgcccgctggcctcgccgctggcc
tccccggtgctcctggaggccgggctgcccctgccgctgccgctgcccctgccgctaccc
ctggcgctgcccgtccccgtgctgcgggcgccggcccgggcgccccccacgctgcccccg
ctgctgcccgcacccctggccccctgcccgccccccatcaagcggaagccgggccggccc
cggcgctccccgccgtccgtgctcgccctggacggcaccaccctggggcgcgacctcctg
ctcctgccaggccagccgcagaccccgctcttccctggcgccgcccgggacccccgcgcc
ctgaccctggacttccggaacacaggggtccctgcgcctccgccgcccccgcccccgccg
ccgcccctgccggccgagccccccaagttgcccttcaaggagctggacaaccagtggcca
tccgaggccatcccgcccgggccccgcggccgcgacgacggcaacgccgaggggcttctg
gacccggccaaggcgcgggtgccctggcgccggcccccgcggaagcgccccgaggacccg
gggatccccgccgcctcgccccctgagtgctccccgccgccgcctccgttccgcccgcgt
tctgagttcgaggagatgaccatcctgtacgacatctggaacggtggcatcgacgacgag
gacgtgcgcttcctgtgcgtcacctacgagcggctgctgcagcaggacaacggcatggac
tggctcaacgacacgctctgggtctaccacccctccaccagcctctcttcagcaaagaag
aagaaacgagacgatggcatgcgtgagcatgtgacaggctgtgcacgcagcgagggcttc
tacaccattgacaagaaggacaagctcagatacctcaacagcagccgggccagcacggac
gagccgcctgctgacacgcagggcatgagcatccccgcgcagccccacgcctccacccgc
gccggctccgagcgtcgttctgagcagcgccgcttgttgtcctccttcactggcagctgt
gacagcgacctgctcaagttcaaccagctcaagttccggaagaaaaagctcaagttctgc
aagagccacattcacgactggggcctgtttgccatggagcccatcgcagccgatgaaatg
gtcattgagtacgtgggccagaatatccgccaggtgattgcggacatgcgggagaagcgc
tatgaggacgagggcattggcagcagctacatgttccgggtcgaccacgacaccatcatc
gatgccaccaagtgtggcaacttcgcgcggttcatcaaccacagctgcaaccccaactgc
tatgccaaggtgatcacggtggagtcacagaagaagattgtgatctactccaagcagcac
atcaatgtcaacgaggagatcacgtatgattacaagttccccatcgaggatgtcaagatc
ccttgcctctgtggctccgagaactgccgggggaccctcaactag
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