Perognathus longimembris pacificus (Pacific pocket mouse): 125349166
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Entry
125349166 CDS
T08928
Symbol
Clip1
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
125349166 (Clip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125349166 (Clip1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
plop04812
]
125349166 (Clip1)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
125349166 (Clip1)
Cytoskeleton proteins [BR:
plop04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
125349166 (Clip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Fungal_TACC
Motif
Other DBs
NCBI-GeneID:
125349166
NCBI-ProteinID:
XP_048198973
LinkDB
All DBs
Position
3:complement(86979148..87079811)
Genome browser
AA seq
2194 aa
AA seq
DB search
MSMLKPSGLKAPTKILKPGNTTLKTPVAAAAPVEKTISSEKASSTPSPETQEEFVDDFRV
GERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCESLKGIFTR
PSKLTRKIQAEDEANGLQMAHASRTASPLSTSAASMASSSQATPSNIPHKSSQPTAKDTS
ATSQISNLTKTASESISNLSEAGSIKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGE
WCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTTPAKAKAAAVRRVM
ATTPASLKRSPSASSLSSMSSVASSVSSKPSRTGLLTETSSRYARKISGTTALQEALKEK
QQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAA
DREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISEDPENTQTKLEHARIKEL
EQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKDLALRGQEVAELRRRLESSKPAG
DVDMSLSLLQEISSLQEKLESTHTDHQREITSLKEHFGTREETFQKEIKALHVATEKLSK
ENESLRSKLDHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGVGTETAEFAELK
TQIERLRLDYQHEIESLQNKQDSERSAHAKEIEALKAKLMTIIKEKEDNLEAMKLRLDKA
EDQHLVEMEDTLNKLQEAEIKVKELEVLQIKCNEQTKAIGNFTSQLKAAEEKLLDLDALR
KASSEGKSEIETLRQQLEAAEKQIKTLEIEKNAESGKASSITKELQGQELKLTNLQDTLS
EVSQVKEALEKELQILKEKFADASEEAVTIQKSMQETVNKLHKKEEEFNMLSSELEKLKE
NLTDMEAKFREQDEREEQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERCVEE
LQLKLTKANENASFLQKNIGEITLKAEQSQQETAKKHEEEKKGLEEKLLDLEKKMETSHN
QCQDLKARYEKASLDMQTKHEEILQNLQKILLDTEERLRTAQEENRCLMQEMDELKTQAE
KAKSLTCLLTSAKKEIELMSEELRGLKSEKQLLAQEGNALKVEKGSLLSKLIEMEAKVTL
LQEDQQKLWSVNETLNVEKEKVFKEKQDAEKLYKQEHIDKEALAIEREKLLKEISVAQEE
LLKIHVENDSLQASKVHMQALIEELHFRTDTLIAMSERARLEKDHLEDQIKKLSAENLIL
TKDKDDIIQKLQSAYEELVKDQKALVHEIEELTSEKRSTAEKQLSLDNMCLALKAERESL
LQSNRDLQVEKDTLHQGQEKLSASLEAALQVKQLLSTEADALHTQLDCASKALRKAELET
RQLQATNTSLTKLLEEIKTSRAITDSECIQLLHEKETLAASERRLLAEKEELLSENRIIA
EKLSKHSEEATHLEMSLNDKITCLTSEKEMACQKITKLKKQQDSLLKEKSALEVQNGDLL
SERENSIKAIGDLKRKYEQEAASRRIIVQEKMKLLGNIDALKKELQERKQVNQELEASKC
DLSLMLKEAQNAKKDLEKEHTNMMQAKENLNAELKTCCCEKNMLLRDGLNLQEECQKLNE
EIHTMQQSLILEKEARAKENESSLYENNKLHGRMVLLEQEVDGLRVCTEQLQSENFVLIQ
EKTKLEQEVVEIIKEKELLSVETAQLAANIETLKSDFAALSKSKLELQELHSCLTKILDD
LRLNHEVAVADRAKALQDNKNVLAEKREMMLRNDELLKEKEKLEESYFLLQKEISQLAKT
NSHISANLLESQSENRTLRKDKSKLTLKIRELETLHSFTAAQTAEDAMQIMEQMTKEKTE
TLASLEDTKQTNAKLQTELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQA
AAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESEYIKDA
DEEKASLQKSISITSALLTEKDAELEKLRNEVSVLRGENASAKSLHSVVQTLESDKVKLE
LKVKNLELQLKENKRQLSSSSGNTDAQAEEDERAQESQIDFLNSVIVDLQRKNQDLKMKV
EMMSEAALNGNGDDLNNYDSDDQEKQSKKKPRLFCDICDCFDLHDTEDCPTQTQMSEDPP
HSTHHGSRSEERPYCEICEMFGHWATNCNDDETF
NT seq
6585 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgctaaaaccaagtgggcttaaggcccccaccaagatccttaagcctggaaat
acaaccttgaagacacctgttgctgctgcagctccagtagaaaaaacaatatccagtgaa
aaagcttcaagtactccatctcctgagactcaagaggaatttgtggatgattttcgagta
ggggagcgtgtttgggtgaacgggaataagcctggatttatccaatttcttggagaaacc
cagtttgcaccaggccagtgggctggaattgttttagatgaacccataggcaagaatgat
ggttctgtagcaggagttcggtattttcagtgcgaatctttaaagggcatatttacccga
ccttcaaagttaacaagaaaaatacaagcagaagatgaagccaatggcctgcagatggct
catgcctccagaactgcttctcctttgtccacttctgcagctagcatggcatcctcatcc
caggccaccccctcaaatattccccataaatcatcccaaccaacagcaaaggatacttca
gccacatctcagatcagcaacctcacaaaaactgccagtgaatcaatttccaacctttca
gaggctggctcaataaagaaaggagaacgggagctcaaaattggagacagagtgttggtt
ggtggcactaaggctggtgtagtccgctttcttggtgagactgactttgctaagggtgaa
tggtgtggtgtggaattagatgaacctcttgggaagaatgatggtgcggttgctggaacc
aggtattttcagtgtcaacccaaatatggcttgtttgctcctgtccacaaagtgaccaag
attggcttcccttctacaacaccagccaaagccaaggctgccgctgtgaggcgtgtgatg
gccaccacccctgcaagcctgaagcgcagcccatctgcctcttccctcagctccatgagc
tctgtggcctcctctgtgagcagcaagccaagccggactggactattgactgaaacctct
tcccgctacgcccgcaagatatcgggcaccactgccctccaggaggcactgaaggagaag
cagcagcacattgagcagctgctggctgagcgggacctggagcgggccgaggtggccaag
gccaccagccacgtgggggagatagagcaggagctagccctggcccgggacgggcatgac
cagcatgtcctagaattggaggccaagatggaccagcttcgaacaatggtggaagcagct
gacagggagaaggtggagcttcttaaccaactggaagaggagaaaaggaaggtcgaggac
cttcaattccgagttgaagaagaatcaattactaaaggcgatcttgagcaaaagagccag
atttctgaagatcctgagaatacgcagaccaaactggagcatgcccgcattaaggagctt
gaacagagcctgctctttgaaaagaccaaagctgacaaactacagagggagttagaagac
actagggtggctacagtgtcagaaaagtcacgtataatggaactagaaaaagacctagca
ttgagaggacaggaagtagctgagctccgaagaaggctagagtccagtaaacctgctgga
gatgtggatatgtcgctttcccttttgcaagaaataagctctttgcaagaaaagttagaa
tccacccatactgaccatcagagagaaataacttctctgaaggagcattttgggactcga
gaagagacatttcagaaggaaataaaggctctgcatgtagccacagagaagctttccaaa
gagaatgagtccttgagaagcaagcttgaccatgctaacaaggagaactcagatgtgata
gctctgtggaagtccaaactggagactgctattgcatcccaccagcaggcaatggaggag
ctgaaggtgtcctttagcaaaggagttggaacagagacagccgaatttgctgagttaaag
acacaaatagagagattgagactagattaccagcatgaaatagaaagtctgcagaataaa
caagactctgaacggtctgctcatgctaaagagatagaagccctgaaggctaaactgatg
acaatcattaaggaaaaggaggacaatctggaagccatgaaattgagactggacaaagca
gaagaccagcatctagtggaaatggaagacacgttaaacaaattgcaggaggctgaaata
aaggtaaaggagctagaggttctgcaaatcaagtgcaatgaacaaaccaaagccattggt
aattttacatcacagctcaaggctgctgaagaaaagctcttggatcttgatgcacttcgg
aaggccagttccgaaggtaaatcggaaattgagacacttagacagcagcttgaggcagct
gagaaacagattaaaactttagagattgaaaagaatgctgaaagtggcaaggctagtagc
attaccaaagagctccaggggcaagagctaaagcttactaaccttcaggacactttgagt
gaagtcagtcaagtcaaagaggctttggaaaaagaacttcagattttgaaagaaaagttt
gctgatgcttcagaagaggcagtcactattcagaaaagtatgcaagaaactgtaaacaag
ttacacaaaaaggaagaagagtttaacatgctgtcttctgaactggagaagttgaaagaa
aatttaacagatatggaggccaaatttagagagcaggatgaaagagaagaacaactggta
aaggcaaaggaaaaattggaaaatgacattgcagaaataatgaagatgtcaggagataat
tcttctcagctgactaaaatgaatgatgagttacgtctgaaagaaagatgtgtagaagaa
ttacagctaaagcttacaaaggctaatgaaaatgcgagttttctgcagaagaatattggg
gaaataactcttaaagctgaacagagccagcaggaaacagccaaaaagcatgaagaggaa
aagaaaggattagaagaaaaattgttggacctggaaaagaaaatggaaacaagccacaac
cagtgtcaggatctgaaagccaggtatgaaaaagctagtttggatatgcaaacaaagcat
gaagaaatcctgcagaatctacagaagatactgttggacacagaggaaaggctaaggact
gcacaggaggagaacagatgcttgatgcaggagatggacgaactgaaaacacaggctgag
aaagccaaatcgctaacttgtttgttaacatcagccaaaaaagaaattgaactaatgtca
gaagagctgaggggtctgaaatcagagaagcagcttcttgcacaggaaggaaatgcttta
aaggtagaaaaaggttcgcttttatcaaaattgatagaaatggaggccaaagtaactttg
cttcaggaagaccaacagaaattatggtcagtaaatgaaactctcaatgtagaaaaggaa
aaagtttttaaagaaaagcaagatgctgaaaagctttacaagcaggaacatattgataaa
gaagctctggctattgagagagaaaaattgcttaaagaaatcagtgttgcacaggaggag
cttttgaagatccatgtggaaaatgactctttgcaagcctccaaggtgcacatgcaggca
ctcatcgaggagctccacttccgcacagatactctgatagctatgtctgagagggctcga
ctagaaaaagaccacctggaggatcagatcaagaagctttctgccgaaaacctcatcttg
acaaaagacaaggacgatatcattcagaaacttcagagtgcttacgaggagcttgtcaag
gatcagaaagccttggtccatgagattgaggagctcacatcagagaagaggtcaacagct
gagaagcagttgagccttgacaacatgtgcctcgccctaaaggcagaacgagagagcctt
ctccaaagcaacagagacctgcaggtcgagaaggacacactacatcagggtcaggagaag
ctgagtgccagcctggaggctgccctgcaggtcaaacagctcctcagcactgaagctgat
gctctgcacacacagctggactgtgccagcaaagcactgaggaaggctgagctggagaca
aggcagcttcaggctaccaatacaagtcttacaaagctcctggaagagattaagacaagt
cgggcaatcacggactctgaatgcatccagcttctccatgagaaagagactctggctgcc
tctgagagaaggcttctggctgagaaagaagaacttttaagtgaaaataggatcattgca
gagaaactcagcaagcattctgaagaagccacccatctcgagatgagtctcaatgacaag
atcacatgcctaacttctgagaaggagatggcttgtcagaaaattactaagcttaaaaag
cagcaggacagcctcttgaaagaaaaatcagcactggaagtacaaaatggagatttactt
tcagagagagaaaattccatcaaagcaataggagaccttaaaaggaagtatgagcaagag
gctgcaagccgaagaataattgttcaggagaagatgaaactactcggtaatatcgatgct
ctgaagaaagagcttcaggagagaaaacaggtaaaccaagagttagaggccagtaagtgt
gacctctctttaatgctgaaagaggctcaaaatgccaaaaaggatcttgaaaaagaacac
accaacatgatgcaagcaaaggagaatttgaatgctgagcttaagacttgttgttgtgaa
aagaacatgttgctaagggatggtttgaacctgcaagaagaatgtcagaaattaaatgag
gagattcatacaatgcagcagtctttaatcttggaaaaagaggccagagcgaaagaaaat
gagtcatccttgtatgaaaacaataaacttcatgggagaatggtgctcttggagcaggag
gtggatgggttaagagtatgtacagagcagcttcaatctgagaattttgtactaatccaa
gaaaagaccaaattggaacaagaagtggtggagataattaaggaaaaggagctcttgagt
gtggaaacagctcagcttgctgccaatatagagaccctgaaaagtgattttgctgctctg
tccaagtccaagttggaactgcaggaactacacagctgcctcaccaagatcctggatgat
cttcggctgaaccacgaggtagctgtggctgacagagcaaaggcactgcaggataacaag
aatgtcctggctgagaaaagagaaatgatgctgagaaatgacgagctcctgaaggagaag
gagaagctggaagaaagctactttctcctacagaaagagattagccagctggccaagacc
aacagccacatttcagccaacctcctagaatctcaaagtgaaaaccgtactttgaggaaa
gacaaaagcaagcttacccttaaaattagagagcttgagactcttcattcatttacggct
gctcagactgcagaagatgccatgcagataatggaacagatgaccaaagagaagacggaa
actctagcctccttggaggacaccaagcaaacaaatgcaaaactacagaccgaattggat
acacttaaagaaaacaacctgaaaaatgtggaagagctgaacaaatcaaaagagcttctg
acagttgagaatcagaaaatggaagaattcaggaaagaaatagaaaccctaaagcaggca
gcagctcagaagtcccagcagctttcagcattgcaagaagaaaacgtcaaacttgctgag
gaactagggagaagcagagacgaagtcacaagtcatcaaaagttggaagaagaaagatct
gtactgaacaatcaattgttagaaatgaaaaagagagaatccgagtacataaaagacgcc
gatgaagaaaaagcttccttgcagaaatccatcagcattactagtgctttactcacagag
aaggacgcagagctggaaaagctgcggaatgaggtctcagtgctcagaggagaaaatgcc
tctgccaagtccctgcattcagtcgttcagactctggagtctgataaggtgaagcttgag
ctcaaggtaaagaacttggagcttcaactcaaagaaaacaagaggcagctcagcagctcc
tcaggtaatactgatgctcaggcagaagaagatgagagagcccaggagagccagattgat
ttcctaaattcggtaatagtggaccttcaaaggaagaatcaagacctgaagatgaaggta
gagatgatgtcagaagcggctctcaacggcaatggagatgacctgaacaattacgacagt
gatgaccaagagaaacaatccaagaagaagccccgcctcttctgtgacatttgtgactgc
tttgatctccacgacacagaggactgccctacccagacacagatgtctgaggaccctccc
cactcaacacaccatggcagccggagtgaggagcggccatactgtgaaatctgcgagatg
ttcgggcactgggcaaccaactgcaacgacgacgagaccttctga
DBGET
integrated database retrieval system
