Perognathus longimembris pacificus (Pacific pocket mouse): 125349994
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Entry
125349994 CDS
T08928
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
125349994
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plop04040
]
125349994
Ion channels [BR:
plop04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
125349994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
125349994
NCBI-ProteinID:
XP_048200220
LinkDB
All DBs
Position
4:complement(56959584..57044444)
Genome browser
AA seq
2007 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPFYINKKTFIVLNKGKAISRFSATSALYILTPFNPIRK
LAIKVLVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSSFELNITSFFNNSL
DGNGTTFNRTVSMFNWDEYIDDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQQAAAAAASAESRDFSGAGG
IGIFSESSSVASKLSSKSEKELKNRRKKKKQKEQSGEEEKEEVVRKSESEDSIRRKGFRF
SLEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFRGRTKDIGSENDFADDEHS
TFEDNDSRRDSLFVPHKHGERRHSNVSQASRASRVLPILPMNGKMHSAVDCNGVVSLVGG
PSALTSPVGQLLPEGTTTETELRKRRSSSYHVSMDLLEDPTSRQRAMSIASILTNTMEEL
EESRQKCPPCWYKFANMCLIWDCCKPWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAM
EHYPMTEQFSNVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVSLSLMEL
GLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVV
GMQLFGKSYKECVCKISNDCELPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTM
CLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDFVK
RKIREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEISKDLNYLKDGNGTTSGI
GSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNAT
SSSEGSTVDIGAPAEGEQPEVEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLR
KTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEML
LKWVAYGFQMYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALS
RFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVS
VVNNYSECKALIDSNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVE
LQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQE
MTNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKY
FVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFG
MSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHP
GSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMF
YEVWEKFDPDATQFIEFAKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDIL
FAFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRR
YLLKQKVKKVSSIYKKDKGKESEGTPVKEVILVDKLNENSTPEKTDVTPSTTSPPSYDSV
TKPEKEKYEKDKSEKEDKGKDIRESKK
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccgccaggacctgacagcttccgcttctttaccagggaa
tcccttgctgctattgaacaacgcattgcagaagagaaagctaagagacccaaacaggaa
cgtaaggatgaagatgatgaaaatggcccaaagccaaatagtgacttggaagcagggaaa
tcccttccatttatttacggagacattcctccagagatggtgtcagagcccctggaggac
ctggatccattctatatcaataagaaaacatttatagtattgaataaaggaaaagcaatc
tcgcgattcagtgccacctctgccctgtacattttaactcccttcaaccctattagaaaa
ttagctattaaggttttggtacattctttattcaatgtgcttattatgtgcactattctt
accaactgtgtatttatgacaatgagtaaccctccagactggacaaagaatgtggagtac
acctttacaggaatttatacttttgaatcacttattaaaatacttgcaagaggcttttgt
ttagaagattttacgtttttacgggacccatggaattggttggatttcacagtcattaca
tttgcatatgtgacagagtttgtggacctgggtaatgtctcagcgttgagaacattcaga
gttctccgggcattgaaaacaatttcagtcattccaggcctcaagaccattgtgggggcc
ctgatccagtcggtaaagaagctctctgacgtcatgattctcactgtgttctgtctgagc
gtgtttgcgctcattgggctgcagctcttcatgggaaacctgagaaataaatgtttgcaa
tggcccccagacaattcttcctttgaactaaatatcacatcgttctttaataattcattg
gatggaaatggcaccacattcaataggactgtgagcatgtttaactgggatgaatacata
gacgataaaagtcacttttattttttggaagggcaaaatgatgctctgctttgtggtaac
agctcagacgcaggccagtgtccagaaggatacatttgtgtgaaggctggtcgaaacccc
aactatggctacacaagctttgacacatttagctgggccttcttgtccctatttcgtctc
atgactcaagacttctgggaaaacctttatcaactgacactacgtgctgctgggaagaca
tatatgatattttttgtgctagtcattttcttgggctcattctaccttataaatttgatt
ctggctgtggtggccatggcctatgaggagcagaatcaagctacactggaagaggcagaa
cagaaagaggcagaatttcagcagatgcttgaacagcttaaaaagcagcaagaagaagct
cagcaagcagcagcagctgcagcctctgctgagtctagagatttcagtggagctggcgga
ataggaattttctccgaaagctcctcggtagcatccaagttgagctccaagagtgaaaaa
gagctgaaaaacagaagaaagaagaagaaacagaaagaacagtctggggaagaagagaag
gaagaggtagttcgaaaatcagaatctgaagacagtataagaagaaaaggattccggttt
tccttagaaggaagtagattgacatatgagaagagattttcttctccacaccagtcttta
ttgagcatcagaggctcccttttctctccaagacgcaacagtagagcgagcctttttagc
ttcagaggtcgaaccaaggacattggttctgagaatgactttgcggatgatgagcacagc
acctttgaggacaatgacagccgaagagactctctgtttgtgccgcacaaacatggtgag
cgacggcacagcaatgtgagccaggccagccgcgcctccagagtccttcccattctgccc
atgaatgggaagatgcacagcgccgtggactgcaatggcgtggtctccctcgtcggggga
ccctctgcactcacgtctcctgttgggcagctcctgccagagggtacaactacagaaact
gagctaagaaagagacgatctagttcttaccatgtttccatggatttgcttgaagacccc
acatcaaggcaaagagcaatgagtatagccagcattttgacaaacactatggaagaactt
gaagaatccagacagaaatgcccaccttgctggtacaagtttgctaacatgtgcttgatc
tgggactgctgcaaaccatggttaaaagtgaagcatatcgtcaacctggttgtgatggac
ccatttgtggacctagccatcaccatctgcattgtcttgaatactctcttcatggccatg
gagcactacccaatgacagagcagttcagcaatgtgctgtccgttggaaatctggtcttc
actgggatcttcacagcagaaatgttcctcaagataattgcaatggatccatattattac
tttcaagaaggctggaatatttttgatggctttattgtgagccttagcttaatggaactt
ggtttggccaatgtggaaggattatcagttctgcgatcattccggctgcttagagttttc
aagttggccaaatcctggcccaccctgaatatgttaattaagatcattggcaactccgtg
ggggcactgggaaacctcaccttggtcttagccatcatcgtcttcatctttgctgtggtt
ggcatgcagctgtttggtaagagctacaaagaatgcgtctgcaagatttccaatgattgt
gaactccctcgctggcacatgaacgacttcttccactccttcctcatcgtgttccgcgtg
ctgtgtggagagtggatagaaaccatgtgggactgcatggaggtggctggccaaaccatg
tgccttaccgtcttcatgatggtcatggtgattggaaacctcgtggttctgaacctcttc
ttagccttgctcctgagttccttcagttctgacaaccttgctgccactgatgatgacaac
gaaatgaataacctccagattgctgtgggaaggatgcagaaaggaattgatttcgttaaa
agaaaaatacgtgaatttattcagaaagcatttgttagaaagcagaaagctttagatgag
attaaacctcttgaagatttaaataacaaaaaagatagctgtatttccaatcacactacc
atagaaataagcaaagacctcaactatctcaaagatggaaacggaaccaccagtggcata
ggtagcagtgtagaaaagtacgttgttgatgaaagcgactacatgtcattcataaacaac
cccagcctaactgtgactgtgcccattgctgtcggagaatctgactttgaaaatttaaac
actgaagagttcagcagcgagtcagatatggaggaaagcaaagagaaactaaatgcaact
agttcatctgaaggcagcacagttgatataggtgctccagctgagggagagcaacctgag
gttgaacctgaagaatcccttgagcctgaggcctgttttacagaagactgtgtacggaag
ttcaagtgctgtcagataagcatagaagaaggcaaagggaagctgtggtggaatctgagg
aaaacatgctacaagatagtggagcacaattggtttgaaactttcattgtcttcatgatt
ctgctcagtagtggagctctggcctttgaagatatttatattgaacagcgcaaaaccatc
aagaccatgttagaatatgccgacaaagttttcacttacatcttcatcctggaaatgcta
ctgaagtgggttgcatatggttttcaaatgtattttacaaatgcctggtgctggctggac
ttcctaattgtggatgtttcattggtcagcttaactgcaaatgccttgggctactcagaa
cttggtgccatcaagtcactcaggacactaagagctctgagaccactgagagctttatcc
cggtttgaaggaatgagggtggttgtaaatgctcttttgggagccattccatccataatg
aatgtccttctggtctgcctgatcttttggctgatattcagtatcatgggagtgaatctc
tttgctggcaagttttatcattgcattaattataccactggagagatgtttgatgtaagt
gtggtcaacaactacagtgaatgtaaagctctcatagatagcaatcaaactgccaggtgg
aaaaacgtgaaagtaaactttgacaacgtcggactggggtatctttccctgcttcaagta
gccacttttaagggatggatggatattatgtatgcagctgttgattctcgaaatgtagaa
ttacaacccaagtatgaagacaatttgtacatgtatctttattttgtcatctttattatt
tttggttcatttttcactttgaatctttttattggtgtcatcatagataactttaaccaa
cagaaaaagaagtttggaggtcaagatatttttatgacagaagaacagaagaaatactac
aatgcaatgaaaaaactgggttcaaagaaaccacaaaaacccattcctcggcctgctaac
aaattccaaggaatggtctttgattttgtaaccaagcaagtcttcgatatcagcatcatg
attctcatctgcctcaacatggtcaccatgatggtggagacagatgaccagagtcaagaa
atgaccaacattttatactggattaatctggtattcattgttctgttcactggagaatgt
gtcctgaaactcatatccctgcggtattactacttcaccattggatggaatatttttgat
tttgtggtggtcattctctctattgtaggaatgtttctagctgagctgatagaaaaatat
ttcgtgtcccctaccctgttccgagtgatccgccttgcccggattggccgaatcctacgt
ttgatcaaaggggccaaaggaatccgcacgctactctttgcgctgatgatgtcacttcct
gccttgttcaacatcggcctcctgctcttcctcgtcatgttcatctacgccatcttcggg
atgtccaactttgcctacgtgaaaagggaagttggaattgatgatatgttcaactttgag
acgtttggcaacagcatgatctgcctgttccaaatcaccacatctgcgggctgggatggg
ttgctagcccccattcttaatagtggacccccagactgtgaccctgagaaagatcaccca
ggaagctcggtgaagggagactgtgggaacccatccgttgggattttcttcttcgtcagc
tatattatcatctccttcctagtggtggtgaacatgtacatcgctgtcatcctggagaat
ttcagtgtggccaccgaagaaagtgcagagcccctgagcgaggatgactttgaaatgttc
tatgaggtttgggagaagttcgatcccgatgccacccagttcatagaatttgccaagctg
tctgattttgcagctgccctggatccaccccttctcatagcaaaaccaaacaaagtccag
ctcattgccatggacttgcccatggtgagtggagaccggatccactgcctcgacatcttg
tttgcctttacaaagcgtgtgttgggtgagagtggagagatggatgcccttcgaatacag
atggaagagcgattcatggcatcaaacccctccaaggtctcttacgagcccatcaccacc
accctgaaacgcaagcaagaggaggtgtcggctatcgtcatccagagagcgtaccgacgc
tacctcctgaagcaaaaagttaaaaaggtctcgtctatatataagaaagacaaaggcaag
gaaagtgaggggacacctgtcaaagaagtcatcctggtagataaactgaacgagaactca
actccagagaaaaccgacgtgactccatccaccacctccccaccttcctatgatagtgtg
accaaaccagaaaaagaaaaatatgaaaaagacaaatcagaaaaagaagacaaagggaaa
gatatcagggaaagtaaaaagtaa
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integrated database retrieval system
