Perognathus longimembris pacificus (Pacific pocket mouse): 125356640
Help
Entry
125356640 CDS
T08928
Symbol
Cad
Name
(RefSeq) LOW QUALITY PROTEIN: CAD protein
KO
K11540
carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase [EC:
6.3.5.5
2.1.3.2
3.5.2.3
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00220
Arginine biosynthesis
plop00240
Pyrimidine metabolism
plop00250
Alanine, aspartate and glutamate metabolism
plop01100
Metabolic pathways
plop01240
Biosynthesis of cofactors
Module
plop_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
125356640 (Cad)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
125356640 (Cad)
00220 Arginine biosynthesis
125356640 (Cad)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plop01002
]
125356640 (Cad)
Enzymes [BR:
plop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.3 Carboxy- and carbamoyltransferases
2.1.3.2 aspartate carbamoyltransferase
125356640 (Cad)
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.2 In cyclic amides
3.5.2.3 dihydroorotase
125356640 (Cad)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
125356640 (Cad)
Peptidases and inhibitors [BR:
plop01002
]
Cysteine peptidases
Family C26: gamma-glutamyl hydrolase family
125356640 (Cad)
Metallo peptidases
Family M38: beta-aspartyl dipeptidase family
125356640 (Cad)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
GATase
CPSase_sm_chain
OTCace_N
OTCace
CPSase_L_D3
ATP-grasp
MGS
Dala_Dala_lig_C
Amidohydro_1
ATPgrasp_Ter
DHOase
ATP-grasp_3
GARS_A
Peptidase_C26
Motif
Other DBs
NCBI-GeneID:
125356640
NCBI-ProteinID:
XP_048209209
LinkDB
All DBs
Position
8:complement(60984232..61007908)
Genome browser
AA seq
2242 aa
AA seq
DB search
MAALVLEDGSVLRGRPFGAAVSAAGEVVFQTGMVGYPEALTDPSYKAQILVLTYPLIGNY
GIPPDEVDEFGLSKWFESSGIHVAGLVVGECCPTPSHWSASCTLHEWLQQHGIPGLQGVD
TRELTKKLREQGSLLGKLVQNGTEPSALPFLDPNARPLVPEVSIKTPQVFNAGGTPRILA
LDCGLKYNQIRCLCQLGAEVTVVPWDHTLHSQEYDGLFLSNGPGDPASYPSVVSALSCVL
AEPNPRPVFGICLGHQLLALAIGAKTYKMRYGNRGHNQPCVLVGSGRCFLTSQNHGFAVE
TDSLPAGWAPLFTNANDGSNEGIVHESLPFFSVQFHPEHRAGPSDMELLFDIFLETVREA
AAGNPGGKTVRERLTERLCPSGLPTPGSGLPPPRKVLILGSGGLSIGQAGEFDYSGSQAI
KALKEENIQTLLINPNIATVQTSQGLADKVYFLPITAHYVTQVIRNERPDGILLTFGGQT
ALNCGVELTKAGVLARYGVRVLGTPVETIELTEDRRAFAARMAEIGEHVAPSEAANSLEQ
AQAAAERLGYPVLVRAAFALGGLGSGFASTKEELSALVAPAFAHTSQVLIDKSLKGWKEI
EYEVVRDAYGNCVTVCNMENLDPLGIHTGESIVVAPSQTLNDREYQLLRRTAIKVTQHLG
IVGECNVQYALNPESEQYYIIEVNARLSRSSALASKATGYPLAYVAAKLALGIPLPELRN
SVTGGTAAFEPSLDYCVVKIPRWDLSKFLRVSTKIGSCMKSVGEVMGIGRSFEEAFQKAL
RMVDENCVGFDHTVKPVSDVELETPTDKRIFVVAAALRAGYSIERLYELTRIDCWFLHRM
KCIVAHAQLLEQHRGQPLPPDLLYQAKCLGFSDKQIALAVLSTELAVRKLRQELGIRPAV
KQIDTVAAEWPAQTNYLYLTYRGSTHDLTFQTPHVLVLGSGVYRIGSSVEFDWCAVGCIQ
QLRKMGYKTIMVNYNPETVSTDYDMCDRLYFDEISFEVVMDIYELENPEGVILSMGGQLP
NNMAMALHRQQCRVLGTSPEAIDSAENRFKFSRLLDTIGISQPQWRELSDLESARQFCKT
VGYPCVVRPSYVLSGAAMNVAYTDGDLERFLSSAAAVSKEHPVVISKFIQEAKEIDVDAV
ACDGVVAAIAISEHVENAGVHSGDATLVTPPQDITPKTLERIKAIVHAIGQELQVTGPYN
LQLIAKDDQLKVIECNVRVSRSFPFVSKTLGVDLVALATRVIMGEKVEPVGLMXGSGVVG
VKVPQFSFSRLAGADVVLGVEMTSTGEVAGFGESRCEAYLKAMLSTGFKIPKKNILLTIG
SYKNKSELLPTVRLLESLGYSLYASLGTADFYTEHGVKVTAVDWHFEEAVDGECPPQRSI
LEQLAENHFELVINLSMRGAGGRRLSSFVTKGYRTRRLAADFSVPLIIDIKCTKLFVEAL
GQIGPAPPLKVHVDCMTSQKLVRLPGLIDVHVHLREPGGTHKEDFASGTAAALAGGVTMV
CAMPNTRPPIIDAPSLALAQKLAEAGARCDYALFLGASSENAGTLGAVAASAAGLKLYLN
ETFSELRLDSVAQWMEHFETWPSHLPIVVHAEKQTVAAILMVAQLTQRSVHICHVARKEE
ILLIKAAKAQGLPVTCEVAPHHLFLSQEDLERLGPGKGDVRPKLGSRQDVEALWENMDVI
DCFATDHAPHTLEEKCGAQPPPGFPGLETMLPLLLTAVSEGRLSLDDLLQRLHHAPRRIF
HLPPQDDTYVEVDLEHEWTIPSHMPFSKARWTPFEGQKVKGTVRRVVLRGEVAYIDGQVL
VPPGYGQDVRKWPQGAVPQPPPSAPATSEITTTPERPRRAIPGLSDGRFHLPPRIHRASD
PGLPAVFLRPGVGISWGKRARAEEPKEKASRKAAETESLGTPESTCHPPPPVPRQASPQN
LAAPGLLHTQTSPLLHSLVGQHILSVKQFTKDQMSHLFNVAHTLRMMVQKERSLDILKGK
VMASMFFEVSTRTSSSFAAAMARLGGAVLSFSEATSSVQKGESLADSVQTMSCYADVVVL
RHPQPGAVELAAKHCRRPVINAGDGVGEHPTQALLDIFTIREELGTVNGMTITMVGDLKH
GRTVHSLACLLTQYRVSLRYVAPPSLRMPPSVWAFVASRGTKQEEFESIEEALPDTDVLY
MTRIQKERFGSTQEYEACFGQFILTPHIMTRAKKKMVVMHPMPRVNEISVEVDSDPRAAY
FRQAENGMYIRMALLATVLGRF
NT seq
6729 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgctggtgttggaggacgggtcggtgctgcggggccggcccttcggggccgct
gtgtcggctgctggggaagtggtgttccagaccggcatggtcggctaccccgaggccctc
actgacccttcctacaaagcacagatcctagtgctgacatatccgctgatcggcaactat
ggcatccccccagatgaagtcgacgagttcgggctcagcaagtggtttgaatcctcgggg
atccatgtggcaggactggtggtgggagagtgctgccccacgcccagccattggagtgcc
tcctgcaccctgcacgagtggctgcagcagcacggtattcctggcctgcaaggagtggat
acccgggagctgactaagaagctgcgagaacaagggtctctgctgggaaaactggtccag
aacgggacagagccttcagccctgccattcttggaccccaatgctcgacccctggtgcca
gaggtctccattaagactccacaggtattcaatgcaggaggcacccctcggatccttgct
ttggactgtggcctcaagtataatcagatccgatgtctgtgccaacttggggctgaggtc
actgtggtaccctgggaccacacattacacagccaggagtacgatggtctcttcctaagt
aatggcccgggtgaccctgcttcctatcccagtgtggtatccgctctgagctgtgtcttg
gctgaacctaatccccgacccgtctttgggatctgcctgggacatcaactgttggccttg
gccattggggccaagacttacaagatgagatacggaaaccgaggccataaccagccctgt
gtgctggtgggctctgggcgctgctttctgacgtcccagaaccatggattcgctgtggaa
acagactccctgccagcaggctgggcacctctgttcaccaatgctaatgatggctcgaat
gaaggcattgtacacgaaagcctgcccttcttcagtgtccagtttcatccagagcaccga
gctggaccttcagatatggagctgctttttgatatctttctggaaactgtgagagaggct
gcagctgggaaccctggaggcaagacagttcgagagcggctgactgagcgcctctgtccc
tctgggctccccacccctggctctgggcttccgccaccacgaaaggttctaattctaggc
tctggaggtctctctattggccaagctggagaatttgactactcaggttctcaggcgatt
aaggccctgaaagaggagaacatccagaccctgctgatcaatcccaacattgccacagtg
cagacctctcagggtctggctgacaaggtctatttccttcctataacagctcactatgta
acacaggtgatacgcaatgaacgtccagatggtatattactgacttttgggggccagaca
gccctaaactgtggtgtagagttaaccaaggccggggtgctagctcggtatggagtccgc
gtcttgggcacacctgtggagaccatcgagctaactgaggatcggcgtgcctttgctgcc
aggatggcagagattggagagcacgtggcccccagtgaggcagcaaattcccttgaacag
gcccaggcagctgctgagcgactaggctatcctgtgctggttcgtgcagcctttgccttg
ggtggtctaggttctggctttgcgtccaccaaggaggagctctcggctcttgtggcccct
gcttttgcccataccagccaggtgctgatagacaagtccttgaagggctggaaggagatc
gagtatgaggtggtgagagacgcctatggcaactgtgtgacggtatgtaacatggagaac
ttagacccactgggcatccacactggtgaatccatagtggttgctccaagccagacactg
aatgaccgagagtaccagctcctgcgccggaccgccatcaaggtgacccaacacctgggg
attgttggagagtgcaatgtacaatatgccttgaacccggagtctgagcagtattacatc
attgaagtaaatgccaggctctctcgaagctctgccctggccagtaaagccacaggctat
ccactagcctatgtggctgccaagctagctttgggcattcccctgcctgagctcaggaac
tctgtcactgggggaacagcagcctttgaacccagcctagactactgtgtggtaaagatt
cctcgctgggacctcagcaagttcctgcgtgtcagtaccaagattgggagctgcatgaag
agtgttggtgaagtcatgggcattggacgttcatttgaggaggccttccagaaggccctg
cgcatggtggatgagaactgtgtaggctttgatcacacagtgaagccagtcagcgatgtg
gagttggagacaccaacagataaaaggatctttgtggtagccgctgctctgcgtgctggt
tactctattgagcgtctttatgagctcacgcgcatcgactgctggttcctgcaccgaatg
aaatgcattgtggctcacgcccagcttctggaacaacaccgcggacagcctctgccccct
gacctgctgtaccaggccaagtgccttggcttctcagacaagcagattgcccttgcagtt
ctgagcacagagctggctgttcgcaagctacggcaggaactgggaatccgccccgcggtg
aagcagattgacacagtcgcagctgagtggcccgcccagacaaattacctgtacctgacg
tacaggggtagcacacatgacctcaccttccaaacaccacacgtcctggttcttggctct
ggtgtctaccgtatcggctccagcgtcgagtttgattggtgtgccgtaggctgcatccag
cagctacgaaagatggggtataagaccatcatggtgaactataaccccgagacggtcagc
accgactacgacatgtgcgaccgactctactttgatgagatctcttttgaggtggtaatg
gacatctatgagctagagaaccctgaaggcgtgatcctgtccatgggtgggcagctgccc
aacaacatggccatggctttgcatcggcagcaatgccgcgtgctgggcacctcccctgaa
gccattgactcggctgagaaccgattcaagttctcccggctcctcgacaccatcggtatc
agtcagcctcagtggagggagctcagtgacctagagtctgctcgccagttctgcaagact
gtagggtacccctgtgtggtgcgcccctcctacgtgctgagtggcgctgctatgaatgtg
gcttacactgatggagacctggagcgcttcttgagtagtgcagcagctgtctccaaggaa
caccctgtggtcatctccaagtttatccaggaggccaaggagatcgatgtcgatgccgtg
gcctgtgacggtgtggtagcggccatcgccatctctgagcacgtggagaatgcaggtgtg
cattcaggagatgccaccttggtgactccaccgcaagacattacccccaaaactctggag
cggatcaaagccattgtgcatgctataggccaggagctccaggtcacaggaccctacaat
ctacagctcatagccaaggatgaccagctgaaagttattgaatgcaacgtgcgtgtgtcc
cggtccttccccttcgtctccaagacactaggtgttgacctagtagccttggccacacgg
gtcatcatgggggagaaggtggagcctgtggggctaatgnacggctctggagtcgttgga
gtaaaggtgcctcagttctccttttcccgcttggcgggggccgatgtggtgctgggtgtg
gagatgaccagtactggggaggtggctggctttggggagagccgttgtgaggcctacctc
aaagccatgctgagtactggctttaagattcccaagaagaacatcctgctgaccattggc
agttacaagaacaaaagcgaactgctccccacggtgcggctgctggagagcctgggttac
agcctctacgccagtctgggcacagccgacttctacactgagcacggagtcaaggtaaca
gctgtggactggcacttcgaagaagcagtggatggtgagtgcccaccacagcgaagcatc
ttggagcaactggccgagaaccactttgagctggtgatcaacctgtccatgcgtggggct
ggtggccggcgtctctcttcttttgtcaccaagggttatcgtacccggcggctggctgct
gacttctctgtgccgctcatcatcgatatcaagtgcaccaaactctttgtggaggctctg
ggccagatcggaccagcccctcctctgaaggtgcatgtagactgcatgacctcccagaag
cttgtgcggctacctggattgattgatgttcatgtgcacctgcgggaaccaggtgggaca
cacaaggaggactttgcctcaggcactgctgccgccctggctgggggtgtcaccatggtt
tgtgccatgcctaatacccggccccccatcattgatgccccttctctggcccttgcccaa
aagctggcagaggctggtgctcgctgtgactatgccctcttcctcggggcctcatctgaa
aacgcaggcaccctgggcgccgtggctgcgtctgcagcagggctcaagctctacctcaac
gagaccttctcggagctgcggctggacagtgtggcccagtggatggagcactttgagacc
tggccgtcccacctccccatcgtagtccacgcggagaaacagactgtcgccgccatcctc
atggtggcccagctgacccagcgctcggtacacatatgccacgtggctcggaaagaggag
atcctgctgattaaagctgcaaaggcacaagggctgcctgtgacctgtgaggtggcccct
caccacctgttcctgagccaggaggacctggaacgccttgggcccgggaagggggacgtc
cggcctaagctgggctcccgccaggatgtggaagccctgtgggagaatatggatgtcatc
gactgctttgccacagaccacgctccccacaccttggaagagaaatgcggggcccagcct
cctcccggcttcccagggctagagaccatgctcccactgctgctgacggccgtgagcgag
ggccggctcagtctggatgacctgctgcagcgactgcaccacgctcccaggcggatcttc
cacctgcccccccaggacgacacctatgtggaggtggatctggagcacgagtggaccatc
cccagccacatgcccttctccaaggcccgctggacgccgttcgagggccagaaggtgaag
ggcactgtccgccgcgtggtcctgcgaggggaagtggcctacatcgacgggcaggtgctg
gtgcccccaggctatggacaagatgtacggaagtggcctcagggtgctgttccccagccc
ccgccctccgccccggccaccagtgagataaccacgacgcctgagaggccacgccgggcc
attccaggtctttctgatggccgcttccacctgccaccccgaatccaccgagcctctgac
cccggtctgccagctgtgttcctccgcccaggagttgggatctcatggggcaaacgagcg
agggctgaagagccaaaggagaaagcctcgcggaaggcagcggagacagagtctctggga
acccctgagagcacctgccaccccccaccaccagtacccagacaggcgtcaccacagaac
ctggcggctcccggcctgctgcacacccagacctcgcccctgttgcactctttagtgggc
caacacatcctgtccgtcaaacagtttactaaggatcagatgtctcatctgttcaacgtg
gcgcacacactgcggatgatggtgcagaaagagcggagcctcgacatcctcaagggcaag
gtcatggcctccatgttcttcgaagtaagcacgcggaccagcagctcctttgcagcagcc
atggcccggctcgggggtgccgtgcttagcttctctgaagccacgtcctccgtccagaag
ggcgaatccctggctgactcggtacagaccatgagctgctacgcggacgtcgttgtgctc
cggcacccccagcctggggcggtggagctggcagccaagcactgccggaggccagtgatc
aacgctggggatggggttggtgagcaccccacgcaggccctgctggacatcttcaccatc
cgggaagagctgggcaccgtgaatggcatgacgatcacaatggtgggcgacctgaagcac
gggcgcaccgtgcactccctggcctgcctgctcacccagtaccgcgtcagcctgcgctac
gtggcgcctcccagcctgcgcatgccgcccagcgtgtgggcttttgtggcctctcgtggc
accaagcaggaggagtttgaaagcatcgaggaggcactgccggacaccgatgtgctctac
atgacccgcattcagaaggagcggttcgggtccacccaggagtacgaggcttgttttggt
cagttcatcctcacgccccacatcatgacccgggccaagaaaaagatggtggtgatgcac
ccgatgccccgcgtcaacgagataagcgtggaggtggactccgacccccgagccgcctac
ttccgccaggccgagaacggcatgtacatccgcatggctctgctagccaccgtgctgggc
cgcttctag
DBGET
integrated database retrieval system
