Perognathus longimembris pacificus (Pacific pocket mouse): 125357232
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Entry
125357232 CDS
T08928
Symbol
Nup50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03013
Nucleocytoplasmic transport
plop05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125357232 (Nup50)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125357232 (Nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125357232 (Nup50)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125357232 (Nup50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
125357232
NCBI-ProteinID:
XP_048209947
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Position
1:complement(3640040..3655048)
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AA seq
470 aa
AA seq
DB search
MAKRIAEKELTDRNWDQDDEAEEVGTFSVASEEVLKNRAIKKARRRNVGFESDSGGAFKG
FKGLVVPSGGGGFSGFGCAGGKPLEGLSNGNSLSSARAAADSKAAFGSFAVNGPIKMDKN
ISDPKANGRGARPSSSSSSFSSSSSSSASPKAGTGSAYREQLASLNCSVRDWIVKHVGAN
PLCDLTPIFKDYEKYLAAIEEQRESGSSSSGSESDAKGPGAQAPPPPSCAAAKLQQEGTF
LFHGSHTETTLEKKREAAPEKKEPGPGATSASFNFGKKVDSSVLGSLSSGSLTGFSFPPG
NSGFFSKDTTQSKSVSSPFPAKTSESQAEGVGNACKGGDEEESDEPPKVVVTEVKEEDAF
YSKKCKLFYKKDNEFKEKGVGTLHLKPTANQKTQLLVRADTNLGNVLLNVLVPSNMPCSR
TGKNNVLIVCVPNPPLDEKNATVPVPMLIRVKTSEDADELHKILLEKKGA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagaatcgccgagaaggaattgacagataggaactgggatcaggatgatgaa
gctgaagaggtgggaacattctcagtggccagtgaagaagtcttgaagaaccgagccata
aagaaagccaggcgtagaaatgttgggtttgaatctgatagtggaggggcctttaaaggt
tttaaaggtttggttgtgccttcaggaggaggagggttttctggatttggctgtgctgga
gggaagcctctggaaggattgtcaaatggaaacagcttgagcagtgccagggcggcggcc
gattccaaggcggcctttggttcttttgctgtaaatggccccataaaaatggataaaaac
atttcagaccccaaggctaatggcagaggcgcacggccctcctcctcctcgtcgtccttc
tcctcgtcctcgtcctcctccgcctcccccaaagctggcacggggagcgcctaccgcgag
cagctggcctccctcaactgctccgtgcgcgactggatcgtgaagcacgtgggcgccaac
ccgctgtgcgacctgacgcccatcttcaaggactacgagaagtacctggcggccatcgag
gagcagcgcgagagcggcagcagcagcagcggctccgagagcgacgccaagggccccggc
gcccaggccccgcctccgccctcgtgcgcggccgccaagctgcagcaggaggggacgttt
ctgtttcacggcagtcacacggagaccaccctagaaaagaagagggaggctgcgcccgaa
aagaaagagccgggaccaggagcaacaagtgcctcattcaacttcggcaagaaagtcgat
agctcggttttgggctcattgagctctgggtctctcactggattttcatttccccctgga
aactccggttttttcagtaaagatacgactcagagcaaatcggtttcttcgccatttcct
gctaaaacctccgagagccaagcagaaggcgttggtaacgcatgcaaaggtggggatgag
gaggagagcgacgagccccccaaggtggtggtgactgaggtgaaggaagaagatgctttc
tactccaaaaagtgtaaactattttacaagaaagacaatgaatttaaagagaaaggtgtg
ggcaccttgcacctgaagcctacagcaaatcagaaaacacagctgctagtgcgggcggac
accaatctaggaaacgtcctgctcaacgtcctggtcccgtccaacatgccgtgctcccgc
accgggaagaacaacgtgctcattgtctgcgtccccaacccgcccctcgacgagaagaac
gccaccgtcccggttcccatgctgatccgggtgaagaccagcgaggacgctgacgagctg
cacaagatcctcctggagaagaagggcgcctga
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