Perognathus longimembris pacificus (Pacific pocket mouse): 125357243
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Entry
125357243 CDS
T08928
Name
(RefSeq) elongation factor 1-alpha 1-like isoform X1
KO
K03231
elongation factor 1-alpha
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03013
Nucleocytoplasmic transport
plop05134
Legionellosis
plop05140
Leishmaniasis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125357243
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
125357243
09174 Infectious disease: parasitic
05140 Leishmaniasis
125357243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125357243
03016 Transfer RNA biogenesis [BR:
plop03016
]
125357243
03012 Translation factors [BR:
plop03012
]
125357243
04131 Membrane trafficking [BR:
plop04131
]
125357243
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plop04147
]
125357243
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
125357243
Transfer RNA biogenesis [BR:
plop03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
125357243
Translation factors [BR:
plop03012
]
Eukaryotic type
Elongation factors
125357243
Membrane trafficking [BR:
plop04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
125357243
Exosome [BR:
plop04147
]
Exosomal proteins
Proteins found in most exosomes
125357243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
125357243
NCBI-ProteinID:
XP_048209956
LinkDB
All DBs
Position
9:complement(42985233..42986828)
Genome browser
AA seq
460 aa
AA seq
DB search
MGKEKTHINIVIIGHVDSGKSTTTGHLIYKCGGINKRTIEKFEKEAAKMGKGSFKYAWVL
DKLKAERERGITIDISLWKSETSKYYVTIIDAPGHMDFIKNMITGTSQADYAVLIVAAGV
GEFEAGISKNGQTRELLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIG
YNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGSASGTTLLEALDCILPPTRPT
DKPLCLPLQDVYKIGGIGTVPVGRVETDVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEA
LPGDNVGFNVKNVSVKDVGRVNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLD
CHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKFGDAAIVDMVPGKPMCVESFSDYPPLG
RFAIRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQKAQKAK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagacccacatcaacattgtcatcattggacacgtcgactccggcaag
tccaccaccaccggacatctgatctacaaatgcggtggcatcaacaagagaaccattgag
aagttcgagaaggaggctgccaagatgggaaagggctccttcaagtatgcctgggtcttg
gataaactgaaggctgagcgggaacgcggtatcaccattgacatctccctgtggaaatct
gagaccagcaagtattatgtgaccatcattgatgccccaggacacatggatttcatcaag
aacatgattacaggcacatctcaggctgattatgctgtcctcattgttgctgctggcgtc
ggtgaatttgaagctggtatctccaagaatggacagacccgtgagcttctggcttacaca
ctgggtgtgaaacagctcattgttggtgttaacaaaatggattccactgagccaccctac
agccagaagagatatgaagaaatcgttaaggaagtcagcacctacattaagaagattggc
tataatcctgacacagtagcatttgtgccaatttctggttggaatggtgacaacatgctg
gagccaagtgccaatatgccttggttcaagggatggaaggtcacacgtaaagatggcagt
gccagtggaaccaccttgctcgaggctttggactgcatcctgccaccaacccgtcccact
gacaagcctttgtgcctgccccttcaggatgtctacaaaattggtggtattggtaccgtc
cctgtgggccgagtggaaactgatgttctcaagcctggcatggtggttacctttgctccg
gtcaatgtcaccactgaagtgaagtctgttgaaatgcatcacgaagctttgagtgaagct
cttcctggggacaatgtgggattcaacgtcaagaatgtgtcagtcaaagatgttggccga
gtcaatgtggctggggatagcaagaacgatccacccatggaagcagctggcttcacagct
caggtgatcatcctgaaccatccaggccaaattagtgctggctatgcccctgtgctggat
tgtcacactgctcacattgcctgcaagtttgctgagctgaaagagaagattgatcgccgt
tctggtaagaagctggaagatggccctaaattcctgaagtttggtgatgctgccatcgtt
gatatggttccaggcaagcccatgtgtgtggagagcttctctgactatcctcctctgggt
cgttttgctattcgtgacatgcggcagacagttgctgtaggtgtcatcaaagccgtggac
aagaaggctgccggagctggcaaggtcaccaagtctgcccagaaagctcagaaggctaaa
tga
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