Perognathus longimembris pacificus (Pacific pocket mouse): 125357890
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Entry
125357890 CDS
T08928
Symbol
Cngb1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04022
cGMP-PKG signaling pathway
plop04024
cAMP signaling pathway
plop04740
Olfactory transduction
plop04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
125357890 (Cngb1)
04022 cGMP-PKG signaling pathway
125357890 (Cngb1)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
125357890 (Cngb1)
04740 Olfactory transduction
125357890 (Cngb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plop04040
]
125357890 (Cngb1)
Ion channels [BR:
plop04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125357890 (Cngb1)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
125357890
NCBI-ProteinID:
XP_048210703
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Position
10:19987033..20038467
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AA seq
1165 aa
AA seq
DB search
MLGWVQKVLPQPPGTPQKAKLEEEEVTEPQLEPQQEPQPELEVHPEPQPQPEPEGAPKEA
APEDEALPHEETADVEGVAEADPSLQALQTQVTVIPSENSPSGWVLTWLWKGMEKIVPQP
VYSSRAAVAGAEDTAQAGEHIPGTCEAGDTAGALGDQDAGPSPWLIRWLEQNLEKVLPQP
PKPTEAWKAEPEDAVLAPEPPEPAPEMERTESPSLPNPGPLEPQEEPGPEPQLGFQASSL
PPPGDPAKLIAWLLRRLEMALPQPVLHGKAGEQQPGSLETCDVQTISILPREQVEHDLVL
EEVDSHWEDSQQGSPVPALEEETEVLVEMPRELPWIQEEKEEEEEGEEEEEEEEEELVVL
LDSCLLVPASVDQSAVDGTQPQTASLQELQEEAQASGSAVPATNEHPEVQVEDTDADSHP
LIVEENPLSPAQLPPSPAKSDTLTVPGSAAGTHRRKLPSPDDEDEEELKALSPVVAWSDP
TTPQEADGQDRAASSASQNSAIINDRLQELVKLFKERTEKVKEKLIDPDVTSDEESPKPS
PAKKAPEPATTAKPTEPEQAEEEHYCDMLCCKFKRRPWKKYQFPESIDPLTNLMYILWLF
FVVLAWNWNCWLIPVRWAFPYQTPDNIHLWLLMDYLCDLIYLLDITVFQMRLQFVRGGDI
ITDKKEMRNNYRKSRRFRMDLLSLLPLDFLYLKFGVNPLLRLPRCLKYMAFFEFNNRLEA
ILSKAYVYRVIRTTAYLLYSLHLNSCLYYWASAYQGIGSTHWVYDGVGNSYIRCYYWAVK
TLITIGGLPDPQTLFEIVFQLLNYFTGVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTV
KYMHFYKIPKSVQNRVKTWYEYTWHSQGMLDESELMVQLPDKMRLDLAIDVNYDIVSKVA
LFQGCDRQMIFDMLKRLRSVVYLPNDYVCKKGEIGREMYIIQAGQVQVLGGPDGKAVLVT
LKAGSVFGEISLLAVGGGNRRTANVVAHGFTNLFILDKKDLNEILVHYPESQKLLRKKAR
RMLRSNNKPKEQKSVLILPPRAGTPKLFNAALAAAGKMGAKGAKGGGKLAHLRARLKELA
ALEAAARQQQLLEQAKSAQEATGEGEAGSAPADQPAAPEPQEPREPVAPRSPPPPASKPE
GGKEEAAGPSELSVEIAEEKKEEAE
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctgggtccagaaggtgctgccgcagcccccaggaactccccagaaagccaag
ttggaggaggaggaagtaacagaaccgcagctagagccgcagcaagagccgcagccggag
ctagaggtacacccagagccgcagccacaacctgagcctgaaggagctcctaaggaggca
gcaccagaggatgaggccctgcctcacgaagagacagctgatgtggagggagtggctgag
gccgatccaagccttcaggctctccagacacaggtcactgtgattcccagcgagaacagt
cccagcggctgggtgctgacctggctctggaagggcatggagaagatcgtgccacagccc
gtctatagtagcagggcagctgttgctggagcagaggacacagctcaggctggagaacac
atcccggggacctgtgaggctggagacacagctggggcccttggggaccaggatgctggg
cccagtccatggctgatcaggtggctggagcagaatctggagaaagtgctgcctcagccc
cccaaacccacagaggcctggaaagctgagcctgaggatgctgtcttggccccagagccc
ccagaaccagcgccggagatggagcgcaccgagagcccctccctgcccaacccaggtccc
ctggagccccaggaggagccgggtccagagccccagcttggctttcaggcctcctccctg
ccaccacccggagaccctgccaagctgatagcatggctcctgcgcaggctggagatggcc
cttccgcagccggtgctccacgggaaggctggggagcagcagcccggctccttagagaca
tgtgatgtgcagaccatcagcatcctccccagggagcaagtggagcacgacctagtcctg
gaagaggttgattcacactgggaggacagccagcagggcagccctgttccagctttggaa
gaggagactgaagttctggtggagatgcccagggagctgccctggattcaggaggagaag
gaagaggaagaggaaggagaggaggaggaagaggaggaagaagaggagttggtagtcctg
ctggatagctgcttgctggtaccggcgagtgtggaccagagtgcagtagacgggacgcag
cctcagacagcatcactgcaggagctgcaggaggaggcccaggccagcggctcagcagtg
ccggccacgaatgagcacccagaggtccaggtggaagacactgatgccgacagccacccc
ctcatcgtcgaggagaatcccctctcccctgcacagctgccaccttcgcctgccaagtct
gacaccctcacggtccccggatcagccgctgggacccacaggaggaagctgccctctccg
gatgacgaggatgaagaagagctcaaggcactgtccccagtggttgcctggtcggacccc
accaccccacaggaggcggatggccaggaccgtgcagcctcctcggccagccagaacagc
gccatcatcaacgaccggctgcaggagctggtgaagctcttcaaggagcggacggagaag
gtgaaggagaagctcatcgatcccgatgtcacctcggatgaggagagtcccaagccctcc
ccagccaagaaagcccctgagccagccaccacagcaaagcccaccgagccagaacaggcc
gaggaggagcactactgtgacatgctgtgctgcaagttcaagcgcagaccatggaagaag
taccagttccccgagagcatcgacccgctgaccaacctgatgtacatcctgtggctgttc
ttcgtggtgctggcctggaactggaactgctggctgatcccagtgcgctgggccttcccc
taccagacgccggacaacatccacctgtggctgctgatggactatctgtgcgacctcatc
tacctcctggacatcacagtcttccagatgcgcctgcagttcgtcagaggcggggacatc
attaccgacaagaaggaaatgcgcaataactaccggaagtctcgtcgatttaggatggac
ctgttgtccctgctacccttggatttcctgtacttgaagtttggcgtgaaccccctcctt
cgcctgccccgctgtttgaagtacatggccttctttgagtttaacaaccgtctggaagcc
atccttagcaaagcctacgtttacagggtcatcagaaccaccgcctacttgctgtacagc
ttgcacctgaactcctgtctttactactgggcgtcagcctaccagggcataggctccact
cactgggtgtatgatggcgtgggaaacagttacattcgctgctactactgggccgtgaag
accctcatcaccatcggggggctgcctgacccccagacgctctttgaaattgtcttccag
ctgctgaactatttcactggtgtctttgctttctctgtgatgattggacagatgagagat
gtggtgggcgccgccacggctggccagacctactatcgcagttgcatggacagcaccgtg
aagtacatgcacttctacaagatccccaagtcggtgcagaaccgtgtcaagacctggtac
gagtacacctggcactcccaaggcatgctggatgagtcagagctaatggtgcagcttccg
gacaagatgcggctggacctggccattgatgtgaactatgacatcgtcagcaaagtggcg
ctctttcagggctgtgaccggcagatgatcttcgacatgctcaagagacttcgctcagtg
gtctacctgcccaacgactacgtgtgcaagaagggggagatcggccgggagatgtacatc
atccaggctgggcaggtgcaggtgctgggcggcccggatgggaaggctgtgctggtgacc
ctcaaagctggatctgtgtttggagagataagcttgctggctgttgggggcgggaaccgg
cgcacagccaacgtggtggctcacggcttcaccaacctcttcatcctggacaagaaggac
ttgaacgaaattttagtccattatcctgaatctcaaaagttactccggaagaaggccagg
cgtatgctgagaagtaacaacaagcccaaagagcagaagagtgtgctcatcctcccccca
cgtgcgggtacccccaagctcttcaacgcagccctggctgccgcgggaaagatgggggcc
aagggagccaaaggtggcggcaagctcgctcacctccgggcgcggctcaaggagctggcg
gcgctggaggctgcagcaagacaacagcagttgctggagcaggccaagagcgcgcaagaa
gccactggagagggagaggcaggctcggcacctgcagatcagccagctgccccggaaccc
caggagccccgggagcccgtagcccctcgctctccacccccaccagcatccaagcctgaa
ggaggcaaggaagaggcagcgggcccctcggagctgtcggtggagatagcggaggagaag
aaggaggaggcagagtga
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integrated database retrieval system
