Pseudomonas lundensis: AA042_07490
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Entry
AA042_07490 CDS
T05473
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
plq
Pseudomonas lundensis
Pathway
plq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
plq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AA042_07490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plq03021
]
AA042_07490
03400 DNA repair and recombination proteins [BR:
plq03400
]
AA042_07490
Enzymes [BR:
plq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AA042_07490
Transcription machinery [BR:
plq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AA042_07490
DNA repair and recombination proteins [BR:
plq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AA042_07490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
AOZ12518
UniProt:
A0A2C8F153
LinkDB
All DBs
Position
complement(1674579..1678652)
Genome browser
AA seq
1357 aa
AA seq
DB search
MAYSYTEKKRIRKDFSKLPDVMDVPYLLAIQLDSYREFLQAGATKDQFRDVGLHAAFKSV
FPIISYSGNAALEYVGYRLGEPAFDVKECVLRGVTYAVPLRVKVRLIIFDKESSNKAIKD
IKEQEVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLYSARI
IPYRGSWLDFEFDPKDCVFVRIDRRRKLPASVLLRALGYTTEQVLEAFYTTNVFHVQGES
ISLELVPQRLRGEIAVIDIMDDKGKVIVEQGRRITARHINQLEKAGVKELVMPLDYVLGR
TTAKAIVHPATGEIIAECNTELTTEILAKVAKSQVVRIETLYTNDIDCGPFVSDTLKIDS
TSNQLEALVEIYRMMRPGEPPTKDAAETLFNNLFFSPERYDLSAVGRMKFNRRIGRTEIE
GSGVLCKEDIVAVLKTLVDIRNGKGIVDDIDHLGNRRVRCVGEMAENQFRVGLVRVERAV
KERLSMAESEGLMPQDLINAKPVAAAVKEFFGSSQLSQFMDQNNPLSEITHKRRVSALGP
GGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLAAYARTNQYGFLESPYRVVK
EGVVTDEIVFLSAIEEADHVIAQASATMNDQKVLIDELVAVRHLNEFTVKAPEDVTLMDV
SPKQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMERNVARDSGVC
VVARRGGVIDSVDASRIVVRVADDEVETGEAGVDIYNLTKYTRSNQNTCINQRPLVRKGD
RVQRSDIMADGPSTDMGELALGQNMRIAFMAWNGFNFEDSICLSERVVQEDRFTTIHIQE
LTCVARDTKLGPEEITADIPNVGEAALNKLDEAGIVYVGAEVGPGDILVGKVTPKGETQL
TPEEKLLRAIFGEKASDVKDTSLRVPTGTKGTVIDVQVFTRDGVERDARALSIEKTQLDE
IRKDLNEEFRIVEGATFERLRSALVGNIAEGGAGLKKGQEITNEVLDGLEHGQWFKLRMA
EDALNEQLEKAQAYIIDRRRLLDDKFEDKKRKLQQGDDLAPGVLKIVKVYLAIRRRIQPG
DKMAGRHGNKGVVSVIMPVEDMPYDANGTPVDVVLNPLGVPSRMNVGQILETHLGLAAKG
LGEKINLMIEEQRKVADLRKFLHEIYNEIGGRQESLDDFSDQEILDLAKNLRGGVPMATP
VFDGAKESEIKAMLRLADLPDSGQMQLTDGRTGNKFERPVTVGYMYMLKLNHLVDDKMHA
RSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMY
KNIVDGDHRMEPGMPESFNVLIKEIRSLGIDIDLETE
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggcttactcatatactgagaaaaaacgtatccgcaaggactttagcaagttgccggac
gtcatggatgtgccgtatctcttggcaatccagctggattcgtatcgtgaattcttgcag
gcgggagcgactaaagatcagttccgcgacgtgggcctgcatgcggccttcaaatccgtt
ttcccgatcatcagctactccggcaatgctgcgctggagtatgtgggttatcgtttgggt
gaaccggcatttgatgtcaaagaatgcgtgttgcgcggtgtaacttacgccgtacctttg
cgggttaaagttcgcttgatcattttcgacaaagaatcgtcgaacaaagcgatcaaggac
atcaaagagcaagaagtctacatgggcgaaatcccattgatgactgaaaacggtaccttc
gttattaacggtaccgagcgtgtaattgtttcccagctgcaccgttccccgggcgtgttc
ttcgaccacgaccgcggcaagacgcacagctccggtaagctgctgtattccgcgcgtatc
attccttaccgtggttcgtggttggatttcgagttcgacccgaaagactgcgtattcgta
cgtatcgaccgtcgtcgcaaattgcctgcgtccgtgcttctgcgcgcattgggttacacc
actgaacaggtgcttgaagcgttctacaccacgaacgtattccacgttcaaggtgagagc
atcagcctggagctggtaccacagcgcctgcgcggtgaaatcgcggtcatcgatattatg
gatgacaagggcaaagtgattgtcgagcaaggccgtcgtattactgctcgccatatcaac
cagctggaaaaagccggtgtcaaagagctcgtaatgcctcttgactatgtcctgggtcgc
acaacggccaaggcaatcgtgcatccggctaccggcgaaatcattgctgagtgcaacaca
gagctgaccactgaaattctggcaaaagttgccaagagtcaggttgtccgtatcgaaacg
ttgtacaccaacgacatcgactgtggtccgttcgtttctgacacgctgaaaattgattcc
accagcaaccaattggaagcgctggtcgaaatctatcgcatgatgcgtccaggcgagccg
ccaaccaaagacgctgccgagaccctgttcaacaacctgttcttcagccctgagcgttat
gacctgtctgcggtcggccgaatgaagttcaaccgtcgtatcggtcgtaccgaaatcgaa
ggttcgggtgtgctgtgcaaggaagacatcgttgcagtgttgaagactctggtcgacatc
cgtaacggtaaaggcatcgtcgatgacatcgaccacttgggtaaccgtcgtgttcgctgc
gttggcgagatggctgaaaaccagttccgtgttggtctggtgcgtgttgagcgtgcagtt
aaagagcgtctgtcgatggcagaaagcgaaggcctgatgccgcaagacctcatcaacgcc
aagccagttgctgcggcggtgaaagagttctttggctccagccagctttcgcagttcatg
gaccaaaacaacccgctttccgaaatcacccacaagcgccgtgtctctgcactgggcccg
ggtggtttgacacgtgagcgtgctggctttgaagttcgtgacgtacacccgactcactac
ggtcgtgtatgcccgattgaaacaccggaaggtccgaacatcggtctgatcaactcattg
gctgcttacgcccgcaccaaccagtatggtttccttgagagcccgtaccgtgttgtgaaa
gaaggcgtagtaaccgacgagatcgtgttcctgtctgccattgaagaagcagatcacgtt
attgctcaggcttcggccaccatgaacgatcagaaagtcctgatcgatgagctggtagct
gttcgtcacttgaacgaattcaccgttaaggcgccggaagacgtcaccttgatggacgtt
tcgccgaagcaggtagtttcggttgctgcgtcgctgattccgttcctcgagcatgacgat
gccaaccgtgcattgatgggttcgaacatgcagcgtcaagctgtaccgacactgcgtgct
gacaagccgctggtgggtacgggtatggagcgcaacgtagcgcgagactcgggggtttgt
gttgtagcccgtcgtggtggcgttattgactccgtggatgcaagtcgtatcgttgttcgc
gttgcagatgatgaagttgaaaccggtgaagccggtgtcgacatctacaacctgaccaag
tacacgcgctccaaccagaacacctgcatcaaccagcgtccgctggttcgcaaaggtgat
cgggtccagcgtagtgacatcatggccgacggtccgtccaccgacatgggtgaactggct
ctgggtcagaacatgcgtattgccttcatggcatggaacggcttcaacttcgaagactcc
atctgcctgtcggaacgtgtcgttcaggaagaccgtttcaccacgatccacattcaggaa
ctgacctgtgtggctcgtgacaccaagcttggtccagaggaaatcactgcagacatcccg
aacgtcggtgaagctgctctgaataaactggatgaggccggtatcgtttatgtgggtgct
gaagtcggcccgggcgacattctggttggtaaagtgacaccgaaaggtgagacgcagcta
acgccagaagagaagctgttgcgcgcaatcttcggtgaaaaagccagtgacgtaaaagac
acttctctgcgtgtgccgaccggcaccaaaggtactgtcattgacgttcaggttttcacc
cgtgacggcgttgagcgtgacgctcgtgcactctcgatcgaaaaaacccagctggacgaa
atccgcaaggatctgaacgaagagttccgtatcgttgaaggtgcaactttcgaacgtctg
cgctctgcattggtgggtaacattgccgaaggcggtgctggtctcaagaaaggccaggaa
atcaccaatgaggtcctggatggtcttgagcatggtcagtggttcaagctgcgcatggct
gaagatgctctgaacgagcaacttgaaaaggctcaggcttacatcatcgaccgtcgtcgt
ctgctggatgacaagttcgaagataagaaacgcaagctgcagcaaggcgatgacctggct
ccaggcgtgttgaaaatcgtcaaggtttacctggcaattcgccgtcgcatccagccgggt
gacaagatggctggtcgtcacggtaacaaaggtgtggtctccgtgatcatgccggttgaa
gacatgccgtacgatgccaatggcaccccggttgatgttgtcctcaacccgttgggcgta
ccatcgcgtatgaacgttggtcagattcttgaaactcacctgggcctcgcagccaaaggg
ttgggcgagaagatcaacctcatgatcgaggagcagcgcaaggttgcagacctgcgtaag
ttcctgcatgagatctacaacgaaattggcggtcgtcaagaaagcctggatgacttctct
gatcaggaaattcttgatctggcgaagaaccttcgcggcggtgttcctatggctaccccg
gtatttgacggtgccaaggaaagcgaaatcaaggccatgctgcgcttggcagatctgccc
gacagcggccagatgcagctgactgacggtcgtaccggcaacaagtttgagcgtccggtt
accgttggctacatgtacatgctgaaactgaaccacttggtagacgacaagatgcatgct
cgttctaccggttcttacagcctggttactcaacagccgttgggtggtaaggcgcagttc
ggtggtcagcgtttcggggagatggaggtctgggcgctggaagcctatggcgcggcatac
actctgcaagaaatgctcacagtgaagtcggacgatgtgaacggtcgtaccaagatgtac
aaaaacatcgtggacggcgatcaccgtatggagccgggcatgcccgagtccttcaacgtg
ttgatcaaagaaattcgttccctcggcatcgatatcgatctggaaaccgaataa
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integrated database retrieval system
