Planctomyces sp. SH-PL14: VT03_17690
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Entry
VT03_17690 CDS
T04354
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls02024
Quorum sensing
pls03060
Protein export
pls03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
VT03_17690 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VT03_17690 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VT03_17690 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pls02044
]
VT03_17690 (ffh)
Enzymes [BR:
pls01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
VT03_17690 (ffh)
Secretion system [BR:
pls02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
VT03_17690 (ffh)
Eukaryotic Sec-SRP protein
VT03_17690 (ffh)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
AAA_30
AAA_31
AAA_33
MeaB
ATP_bind_1
APS_kinase
AAA_17
AAA_18
Thymidylate_kin
ABC_tran
NPHP3_N
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AMV19734
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All DBs
Position
4522841..4524325
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AA seq
494 aa
AA seq
DB search
MFEGITSSLSDVFGNIVRGKLTEGNIREGMQKVRQALLEADVNYDVAKDFCDKVTEQAVG
ERVLKSFNPTEQIVSIVYQELCNLMGPVDHSIEMRRGEVTVLMMCGLQGAGKTTTCGKLA
QMLRQHGAKPMLVAADLQRPAAIEQLKVIGQQLNIPVYAEEPGKSNPVQVCVNGRKEAQK
QGCSVLILDTAGRLHVDDALMKELVEIDNKLMPHQVLLVCDAMTGQDAVKSAKAFNDALE
LDGVILTKLDGDTRGGAALSVKSVTGVPIKFVGVGEQLDKIQPFHPERMAQRILGQGDVA
TLLEIAQEKLDQTEIERQQQQMASGKFTLDDFLSAMRQIKRMGSMKGLLKLIPGMGQIAA
ALDQADGMDPDKDLRRIEAVISSMTLDERRNPDKIDRSRRNRIAAGSGSDPVVVHELLKQ
FDGMRSMMTKMAGMSALDRMKAMNSLPQLMQPGVQLGNPKERSARGPQERDKVRDLKKKQ
RLQAKEARKRNKKR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaggcataacctcaagcctctccgatgttttcggcaatatcgtccgcggcaag
ctgaccgaaggaaacatccgcgaggggatgcagaaggtccgccaggccctcctcgaagcc
gacgtcaactacgacgtcgccaaagacttctgcgacaaagtcaccgaacaggccgtcggc
gaacgcgtcctcaagtccttcaacccgaccgaacagatcgtctcgatcgtctatcaggaa
ctctgcaacctgatgggccccgtcgatcactcgatcgagatgcgccgcggcgaagtcacc
gtcctcatgatgtgcggccttcagggggccggtaagaccaccacctgcggcaagctggcc
cagatgctccgccagcacggcgccaagccaatgctcgtcgcggccgacctccagcgcccc
gccgccatcgagcagctcaaggtcatcggccagcagctcaatatcccggtctacgccgaa
gaacccggaaaatcgaacccggtccaggtctgcgtcaacggccggaaagaagcccagaaa
cagggctgcagcgtcctgatcctcgacaccgccggccgcctccacgtcgacgacgcgctc
atgaaagagctcgtcgagatcgacaacaagctgatgccgcaccaggtgctgctcgtctgc
gacgccatgaccggccaggacgcggtcaagagcgccaaggccttcaacgatgccctcgag
ctcgacggcgtcatcctcaccaagctcgacggcgacacccgcggcggggccgccctctcg
gtcaagtcggtcaccggcgtcccgatcaagttcgtcggggtcggtgaacagttggacaag
atccagccgttccacccggaacgaatggcgcagcggatcctcggccagggggatgtcgcg
accctgctggagatcgcgcaggagaaacttgatcagacggaaatcgaacgccagcaacag
caaatggcgtcgggcaagttcacgctcgacgatttcctgtcggcgatgaggcagatcaag
cggatggggagcatgaaggggctcctgaaactgatcccggggatgggccagatcgcggcg
gccctcgatcaggccgatgggatggacccggacaaggatctgcggcggatcgaagccgtg
atctcctccatgacgcttgacgaacggcgaaatcctgacaaaatcgatcgttcccgccga
aatcgaatcgcggcggggagcggatccgatccggtggtcgtgcacgagctgctcaagcag
ttcgacggcatgcggtcaatgatgaccaagatggccggcatgagcgccctcgatcggatg
aaggccatgaattccctgccgcagctgatgcagccgggcgttcaattggggaatcccaag
gaacgttccgccaggggcccgcaggagcgggacaaggttcgcgatttgaagaagaagcag
cgtctgcaggccaaagaggctcgcaaacgcaacaagaagcggtga
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