Paenibacillus lutimineralis: EI981_17425
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Entry
EI981_17425 CDS
T06479
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
plut
Paenibacillus lutimineralis
Pathway
plut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EI981_17425 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plut03019
]
EI981_17425 (rny)
Messenger RNA biogenesis [BR:
plut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EI981_17425 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
KH_NusA_2nd
KH_2
Propep_M14
Motif
Other DBs
NCBI-ProteinID:
AZS16038
UniProt:
A0A3S9V0F1
LinkDB
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Position
complement(3953390..3954934)
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AA seq
514 aa
AA seq
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MPTSIWIILVAVAALFFGFGIGYFIRKSLAEAKISSAEQAASQILESAKKDAEALKKETV
LEAKDEIHKLRTEADKDIRERRNEIQRQERRLLQKEESLDKKIESLERKEEQVAGKEKRI
EETQQQIDLLYKSQVQELERISNLSMEDARTIILNNVEQEVRHETAQMIKDIELQAKEEA
DKKSREIITLAIQRCAADHVAETTVSVVALPNEEMKGRIIGREGRNIRALETLTGIDLII
DDTPEAVILSGFDPIRREIARTALEKLVADGRIHPARIEEMVEKSRREVDERIREYGEQA
TFEVGVHALHPDLIKILGRLKFRTSYGQNVLKHSMEVAYLAGLMAAELGEDIALAKRAGL
LHDIGKALDHEVEGSHVEIGVELAKKYKEHPVVINSIASHHGDCEATSVIAMLVGAADAL
SAARPGARRETLETYIRRLEKLEEISESFEGVEKSFAIQAGREVRVMVQPEKIDDAEAFR
LARDITKKIESELDYPGHIKVTVIRETRAVEYAK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcccacatcaatctggatcattctcgttgccgtcgccgctttattctttgggttcggg
atcggatattttattcgcaaatctcttgcagaggctaaaatttccagtgcggaacaagct
gcaagtcaaattttggaaagtgcaaaaaaagacgcagaagcactgaaaaaggaaacggtt
ctggaagctaaagacgaaattcataaactgagaaccgaggctgataaagacattcgtgaa
cgtcggaatgaaattcaacgacaagaaagacgattgttgcaaaaagaagagtcgctggat
aaaaaaattgaatcactggaacgtaaagaagaacaagtagctggcaaagagaagagaatt
gaagaaacccagcaacagatcgacctgctctataagagtcaggttcaggaacttgagcgt
atttccaatttgagcatggaagacgcccgcacgatcattcttaataatgtcgagcaggaa
gttcgccatgaaacggctcaaatgattaaagacattgagttgcaggcgaaggaagaggcc
gataagaaatcacgtgaaatcattacgctagcgattcagcgttgcgctgctgatcacgtt
gctgagacgactgtctcggtagttgctcttccgaatgaagagatgaagggtcggattatc
ggacgtgaaggccgtaacatcagagcactggagacgttgaccggtattgacttgattatc
gatgatacgccggaagcggtcatcctgtcaggctttgatccaatccgtcgtgaaattgcc
cgcacagcgctggagaaactggtagctgacggacgaattcacccagcacggatcgaagag
atggttgagaaatcacgtcgtgaagtggacgaaagaattcgtgaatacggtgaacaagcg
acatttgaggttggtgttcacgcgctgcacccggatttaatcaagattttgggtcgtctc
aagttccggacaagctatggtcagaacgtgctgaagcactcgatggaagtagcttacttg
gccgggcttatggccgccgagttaggcgaggatattgcgctcgccaaacgtgccggattg
ttgcatgacatcgggaaagcgctggatcatgaagtggaaggatctcatgtcgaaatcggc
gtggaactggcgaagaagtataaggaacatccggttgttatcaacagtatcgcttcccac
cacggagattgtgaagctacttcggttatcgctatgctggttggtgcggccgatgcattg
tcggcagctagacctggcgctcggcgtgaaacgttggaaacctatatccgtcgtttggag
aaactggaagagatctcagaatcgttcgaaggtgtggagaagtcgttcgcaattcaggca
ggccgcgaggttcgtgttatggtgcagcctgagaagatcgatgatgccgaagcgttccgt
ctggctcgtgacattacgaagaagattgagagtgaactggattatccgggtcacatcaag
gttacggtcattcgtgagacgagagcggttgaatatgcgaagtaa
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