KEGG   Paenibacillus lutimineralis: EI981_17425
Entry
EI981_17425       CDS       T06479                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
plut  Paenibacillus lutimineralis
Pathway
plut03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:plut00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EI981_17425 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:plut03019]
    EI981_17425 (rny)
Messenger RNA biogenesis [BR:plut03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     EI981_17425 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_KhpA-B KH_NusA_2nd KH_2 Propep_M14
Other DBs
NCBI-ProteinID: AZS16038
UniProt: A0A3S9V0F1
LinkDB
Position
complement(3953390..3954934)
AA seq 514 aa
MPTSIWIILVAVAALFFGFGIGYFIRKSLAEAKISSAEQAASQILESAKKDAEALKKETV
LEAKDEIHKLRTEADKDIRERRNEIQRQERRLLQKEESLDKKIESLERKEEQVAGKEKRI
EETQQQIDLLYKSQVQELERISNLSMEDARTIILNNVEQEVRHETAQMIKDIELQAKEEA
DKKSREIITLAIQRCAADHVAETTVSVVALPNEEMKGRIIGREGRNIRALETLTGIDLII
DDTPEAVILSGFDPIRREIARTALEKLVADGRIHPARIEEMVEKSRREVDERIREYGEQA
TFEVGVHALHPDLIKILGRLKFRTSYGQNVLKHSMEVAYLAGLMAAELGEDIALAKRAGL
LHDIGKALDHEVEGSHVEIGVELAKKYKEHPVVINSIASHHGDCEATSVIAMLVGAADAL
SAARPGARRETLETYIRRLEKLEEISESFEGVEKSFAIQAGREVRVMVQPEKIDDAEAFR
LARDITKKIESELDYPGHIKVTVIRETRAVEYAK
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgcccacatcaatctggatcattctcgttgccgtcgccgctttattctttgggttcggg
atcggatattttattcgcaaatctcttgcagaggctaaaatttccagtgcggaacaagct
gcaagtcaaattttggaaagtgcaaaaaaagacgcagaagcactgaaaaaggaaacggtt
ctggaagctaaagacgaaattcataaactgagaaccgaggctgataaagacattcgtgaa
cgtcggaatgaaattcaacgacaagaaagacgattgttgcaaaaagaagagtcgctggat
aaaaaaattgaatcactggaacgtaaagaagaacaagtagctggcaaagagaagagaatt
gaagaaacccagcaacagatcgacctgctctataagagtcaggttcaggaacttgagcgt
atttccaatttgagcatggaagacgcccgcacgatcattcttaataatgtcgagcaggaa
gttcgccatgaaacggctcaaatgattaaagacattgagttgcaggcgaaggaagaggcc
gataagaaatcacgtgaaatcattacgctagcgattcagcgttgcgctgctgatcacgtt
gctgagacgactgtctcggtagttgctcttccgaatgaagagatgaagggtcggattatc
ggacgtgaaggccgtaacatcagagcactggagacgttgaccggtattgacttgattatc
gatgatacgccggaagcggtcatcctgtcaggctttgatccaatccgtcgtgaaattgcc
cgcacagcgctggagaaactggtagctgacggacgaattcacccagcacggatcgaagag
atggttgagaaatcacgtcgtgaagtggacgaaagaattcgtgaatacggtgaacaagcg
acatttgaggttggtgttcacgcgctgcacccggatttaatcaagattttgggtcgtctc
aagttccggacaagctatggtcagaacgtgctgaagcactcgatggaagtagcttacttg
gccgggcttatggccgccgagttaggcgaggatattgcgctcgccaaacgtgccggattg
ttgcatgacatcgggaaagcgctggatcatgaagtggaaggatctcatgtcgaaatcggc
gtggaactggcgaagaagtataaggaacatccggttgttatcaacagtatcgcttcccac
cacggagattgtgaagctacttcggttatcgctatgctggttggtgcggccgatgcattg
tcggcagctagacctggcgctcggcgtgaaacgttggaaacctatatccgtcgtttggag
aaactggaagagatctcagaatcgttcgaaggtgtggagaagtcgttcgcaattcaggca
ggccgcgaggttcgtgttatggtgcagcctgagaagatcgatgatgccgaagcgttccgt
ctggctcgtgacattacgaagaagattgagagtgaactggattatccgggtcacatcaag
gttacggtcattcgtgagacgagagcggttgaatatgcgaagtaa

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