Paenibacillus lycopersici: GXP70_08880
Help
Entry
GXP70_08880 CDS
T07013
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
plyc
Paenibacillus lycopersici
Pathway
plyc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GXP70_08880 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plyc03400
]
GXP70_08880 (uvrC)
DNA repair and recombination proteins [BR:
plyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GXP70_08880 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
GIY-YIG
UVR
HHH_2
5_3_exonuc
DUF4602
FG-GAP_2
Motif
Other DBs
NCBI-ProteinID:
QHT60046
UniProt:
A0A6C0FSB8
LinkDB
All DBs
Position
2063731..2065851
Genome browser
AA seq
706 aa
AA seq
DB search
MGDNHASETSADRRLAEERIRGKLALLPDQPGCYLMKDGSGTIIYVGKAKVLKNRVRSYF
NGSHNGKTLRLVSQIRDFEYIVTSSNMEALILECNLIKQYHPRYNVLLKDDKTFPYIKIT
SEKHPKLEVTRRIVKDKGKYFGPYPNAFAAQQTKKLLDRLYPLRKCGTLPDKVCLYYHLG
QCVAPCEFDIAPGTYETMVQEITRFLGGGHDEVRKALQAKMEAAAEEMEFERAKEFRDQI
IAIDAVMEKQKITMNDAMDRDVFGFAVDKGWMCVQIMYMRQGKLIERRATMFPYYGNAYD
DFMTFVTQYYSENPALPKEIFLPALPGADTAEELAPSMEAADGQGAGSVTLTDAAEARQP
ASLAAEAQSDYRLGHEAVAAETEGETETETEGGETEASVAIRAVEADEDAADAEEAPAAG
TPEAELRSSLQKWLKVKVFIPQRGRKKDVVAMAVHNASMALEEKFKLIERDEDRTFKAAE
GLAEAIGLPQVSRIEAFDNSNIQGTNPVSAMVVFTDGKPDKKEYRKYKVKTVQGPDDYET
MREVVRRRYERVLNEGLPLPDLIIVDGGRGQISAALDVLENELGLAVPVCGLVKDAKHKT
AQLMTGDPPEVVPLARDSQAFYLLQRIQDEVHRFAITFHREQRAKSMVASRLDAIPGIGE
KRRKALLKHFGSIKKIKEAAIEDFRPLSIGEKLAAQIIEALREEPS
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacaatcacgcaagcgagacgtccgccgacaggcgtcttgcggaagaacggatc
cgcggcaagctcgcgctgctgccggatcagcccggctgctatttaatgaaggacggcagc
ggcaccatcatctatgtcggcaaggcgaaagtgctcaaaaatcgcgtgcggtcgtatttt
aacggcagccataacggcaagacgctgcggctcgtctcgcagatccgcgatttcgaatat
atcgtcacgtccagcaacatggaagcgctcattctcgagtgcaatttgatcaagcagtat
cacccgcgctacaacgttctgctcaaggacgacaagacgtttccttatatcaaaatcacg
agcgagaagcatcccaagctcgaggtgacgcggcgcatcgtgaaggacaagggcaagtat
ttcggaccgtatccgaacgcgttcgcggcccagcagacgaagaagctgctcgaccggctg
tatccgctgcgcaaatgcgggacgctgccggacaaggtatgtctctactatcatctggga
caatgcgtcgcgccatgcgaattcgatatcgcgccggggacgtacgagacgatggtccag
gagattacccggtttctgggcggcgggcatgacgaggtgaggaaggcgctgcaggccaag
atggaagcggccgccgaggagatggaattcgaacgggcgaaggaattccgcgaccagatt
atcgccatcgacgccgtcatggagaagcagaagattacgatgaacgacgcgatggaccgc
gacgtgttcggcttcgcggtcgacaagggctggatgtgcgtgcaaatcatgtacatgcgg
cagggcaagctgatcgagcgccgggcgacgatgttcccgtattacggcaatgcgtacgac
gacttcatgacgttcgtgacccagtattattcggagaacccggcgctgccgaaggagatt
ttcctgccggcgctgcccggcgcggataccgcggaggagctagcgccatcgatggaagcg
gctgacggacaaggcgccggctccgttacgctgacggatgcggcggaagccaggcagccg
gcatcgctcgccgccgaagcgcaatccgattaccggctcggccatgaggccgtcgcggcc
gaaacggaaggcgaaacggaaacggaaacggaaggcggcgaaactgaagcttccgtcgcg
atcagagcggtcgaagcggacgaggatgcagccgatgccgaagaagcgccggccgccggc
acgccggaagcggagctgcggagctcgctgcagaaatggctgaaggtgaaggtgttcatt
ccccagcgcgggcggaagaaggacgtcgtggccatggccgttcataatgccagcatggcg
ctcgaagagaagttcaagctgatcgagcgcgacgaggaccgcacgttcaaggcggcggaa
gggctcgcggaagcgatcggcctgccgcaggtgagccggatcgaagcgttcgacaactcc
aacatccagggcacgaatcccgtgtccgcgatggtcgtcttcacggacggcaagccggac
aagaaggaataccgcaagtataaggtcaagaccgtccaaggcccggacgattacgagacg
atgcgggaagtcgtccgccgccgctacgagcgggtgctgaacgaagggctgccgctgccg
gatctgatcatcgtcgacggcggccggggacagatctcggccgcgctggacgtcctggag
aacgagctcggcctcgccgttccggtatgcggcctcgtcaaggacgccaagcataagacg
gcgcagctcatgacgggcgaccctccggaagtggtgccgctcgcgcgcgacagccaggcg
ttctacctgctccagcgcattcaggacgaggtgcaccgtttcgccatcacgttccaccgc
gagcagcgggccaagtcgatggtcgcctcgaggctcgacgccattccgggcatcggcgag
aagcggcgcaaggcgctcctgaagcatttcggctccattaagaaaatcaaagaggccgca
atcgaagatttccggcctctgtcgatcggcgagaagctcgccgcgcaaattatcgaagca
ttgagggaggaaccgtcctag
DBGET
integrated database retrieval system
