Pseudoalteromonas luteoviolacea: S4054249_05070
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Entry
S4054249_05070 CDS
T04577
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
plz
Pseudoalteromonas luteoviolacea
Pathway
plz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
S4054249_05070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plz03400
]
S4054249_05070
Enzymes [BR:
plz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
S4054249_05070
DNA repair and recombination proteins [BR:
plz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
S4054249_05070
Prokaryotic type
S4054249_05070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AOT07266
LinkDB
All DBs
Position
1:1176138..1176797
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AA seq
219 aa
AA seq
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MISWQTLIEAQKQQPYLQETLAHVAQRRSEGVTVYPPDEQVFSALNETALEDIKVVILGQ
DPYHGPNQAHGLCFSVLPGVKVPPSLVNMYKELVNDIDGFEIPAHGYLLPWAQQGVLLLN
TVLTVEQGQAHSHKKLGWERFTDVVINTINEHCDGVIFLLWGAHAQKKGKEIDTSRHHVL
HAPHPSPLSAHRGFFGCQHFSKTNALLQSMGKPPIDWQI
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgatatcgtggcaaacgctcattgaagctcaaaagcagcagccttatttacaggaaact
ttggcgcatgttgcgcaaagacgcagtgagggcgtaacagtttatccacccgatgaacag
gtattttcagcgctaaatgaaacggcacttgaggatattaaggtcgtgatactgggacaa
gatccctaccatggcccaaaccaagctcacggattatgtttttcggtattaccaggggta
aaggttcctccttctttggtcaacatgtataaagagttggttaacgatattgatgggttt
gagatccccgctcatggttacttattaccctgggcccaacaaggtgttttgttactaaat
acggtgctgactgtcgaacaaggtcaggctcactctcataaaaagttggggtgggagcgt
ttcactgatgtggtgataaacaccattaatgaacattgtgatggggtgatatttttattg
tggggcgcacacgcgcaaaagaaaggtaaagagatagacacgtcacgccatcatgttttg
catgcgccacatccctcaccgctgtcggcgcatagaggtttttttggatgtcagcatttt
tccaaaaccaacgcgttgctacaatctatgggtaaaccccccatcgactggcaaatataa
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