Prochlorococcus marinus subsp. marinus CCMP1375: Pro_1640
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Entry
Pro_1640 CDS
T00137
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta subunit/140 kD subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pma
Prochlorococcus marinus subsp. marinus CCMP1375
Pathway
pma03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pro_1640 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pma03021
]
Pro_1640 (rpoB)
03400 DNA repair and recombination proteins [BR:
pma03400
]
Pro_1640 (rpoB)
Enzymes [BR:
pma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Pro_1640 (rpoB)
Transcription machinery [BR:
pma03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Pro_1640 (rpoB)
DNA repair and recombination proteins [BR:
pma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Pro_1640 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
AAQ00684
UniProt:
Q7VA29
LinkDB
All DBs
Position
complement(1496129..1499419)
Genome browser
AA seq
1096 aa
AA seq
DB search
MSRSAIQVAKTATYLPDLVEVQRASFKWFLEKGLIEELENFSPITDYTGKLELHFIGSEY
RLKRPRHDVEEAKRRDATFASQMYVTCRLVNKETGEIKEQEVFIGELPLMTERGTFIING
AERVIVNQIVRSPGVYFKDEQDKNGRRTYNASVIPNRGAWLKFETDKNDLLHVRVDKTRK
INAHVLMRAMGLSDNDVIDKLRHPEYYKKSIQAADDEGISSEDQALLELYKKLRPGEPPS
VSGGQQLLQSRFFDAKRYDLGRVGRYKINKKLRLTIPDSVRTLTHEDVLSTIDYLINLEL
DVGGATLDDIDHLGNRRVRSVGELLQNQVRVGLNRLERIIKERMTVGETDSLTPAQLVNP
KPLVAAIKEFFGSSQLSQFMDQTNPLAELTHKRRISALGPGGLTRERAGFAVRDIHPSHY
GRLCPIETPEGPNAGLINSLATHARVNSYGFIETPFWKVEEGRVIKVGDPIYLSADLEDE
CRVAPGDVATDKDGMILADLIPVRYRQDFEKVPPAQVDYVQLSPVQVISVATSLIPFVEH
DDANRALMGSNMQRQAVPLLRPERPLVGTGLETQVARDSGMVPISQVNGTVTYVDANSIV
VTDDEGGEHLHELQKYQRSNQDTCLNQRPIVRNGDKVIIGQVLADGSACEGGEIALGQNV
LIAYMPWEGYNYEDAILVSERLVKDDLYTSVHIEKYEIEARQTKLGPEEITREIPNIAEE
SLGNLDEMGIIRVGAFVESGDILVGKVTPKGESDQPPEEKLLRAIFGEKARDVRDNSLRV
PSTEKGRVVDVRIYTREQGDELPPGANMVVRVYVAQRRKIQVGDKMAGRHGNKGIISRIL
PREDMPYLPDGTPVDIVLNPLGVPSRMNVGQVFELLMGWAAANLDCRVKVVPFDEMYGAE
KSYETVQLYLKEAAKQPGKEWVFNPDDPGKLLLRDGRTGEAFDQPVAVGYSHFLKLVHLV
DDKIHARSTGPYSLVTQQPLGGKAQQGGQRLGEMEVWALEAYGAAYTLQELLTVKSDDMQ
GRNEALNAIVKGKPIPRPGTPESFKVLMRELQSLGLDIGVYTDEGKEVDLMQDVNPRRST
PSRPTYESLGSDYQED
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaagcgcgattcaggtcgctaagaccgcgacatatctgcccgatttggttgag
gtgcagcgggcaagcttcaaatggttcctagagaaaggattaatagaggagcttgaaaat
ttttctccaataacggactatacaggtaagctggaacttcattttattgggagtgaatat
agacttaagcgtccaagacatgatgttgaagaagcaaaaagaagagatgcaacttttgct
tctcaaatgtatgtcacttgtcgattagttaataaagaaactggtgaaataaaagaacaa
gaagtatttataggtgaacttccattaatgactgaaagaggtacatttatcattaatggt
gccgaaagagttattgttaatcaaattgtaagaagtcctggtgtttattttaaagatgag
caggataaaaatggtagaagaacttataatgcaagtgttatccctaatcggggagcttgg
ttaaaatttgaaactgacaagaatgatcttctacatgtaagagtcgataaaaccagaaaa
ataaatgcacatgtattaatgagggcaatgggtctctcggataatgatgttattgataag
ttaagacatccagaatattataagaagtctattcaggcggctgatgatgaagggattagt
tccgaagatcaggcacttcttgaactttataagaaactaagacctggggaacctccttct
gttagtggtggtcagcagctacttcaaagtagattctttgatgctaaacgatatgactta
ggtagagtcggtagatataagattaacaagaaattaagactaactattccagattcagtc
agaacattgactcatgaagatgttctttctacgattgactatttgatcaatttagagctt
gatgttggaggagcaactttagatgatattgatcacttaggtaaccgtagagttagatca
gttggtgaattgcttcagaatcaagttcgagtaggacttaatcgattagaaagaattatt
aaagaaagaatgacagttggcgagactgattccttaacacctgctcagcttgttaatccc
aaacctcttgtagctgctattaaagagttttttggctcaagtcagttaagccagtttatg
gatcaaactaatccacttgctgaattaactcacaaaaggcgtatatctgctttaggtcct
ggaggtttgacaagggagagagcaggttttgctgttcgtgatattcacccttctcattac
ggtcgattatgtccaatagaaactcctgaggggccaaatgcaggattgattaattcactt
gctactcatgcgagagttaattcttatggctttatagaaaccccattttggaaggtagag
gaaggaagagttattaaagtaggagaccctatttatctttctgcagatttagaagatgaa
tgccgagtggctccaggtgatgttgcaactgacaaagatggcatgatattggcagatttg
attccagtcagatatcgccaagattttgaaaaagtaccgccagctcaagttgattatgtt
caactttctccagttcaagttatttctgtagcaacatctcttatcccatttgttgaacat
gatgatgccaacagagctttaatgggatcaaatatgcagcgtcaagctgtaccactttta
agacctgagcggccgcttgttggtactggattagagactcaagttgcaagagattctggg
atggtgcctatttcgcaggtaaatggaacagtcacttatgtagatgcaaattcaattgtc
gtaactgacgatgagggtggcgagcatttacatgagttacagaaatatcaaaggtcaaat
caagatacttgtcttaatcaaagaccaatagtaaggaatggagacaaagttataattggt
caagttttagctgatggttctgcttgtgaaggtggtgaaatcgccctgggacaaaatgtt
ttaatcgcgtacatgccttgggaaggatataactatgaggatgcaattttagttagcgag
agattagtcaaagatgacttatatacttccgtccatatagaaaagtatgaaatagaagct
aggcaaacaaaattgggccctgaggagattactagagagatacccaatattgcagaagag
agcctaggtaatcttgatgaaatggggattattcgtgtaggagcttttgtagaaagtgga
gatattcttgtaggtaaagttacccctaagggggaatctgatcaaccgcctgaagaaaag
cttttgagagcaatttttggagagaaagctcgcgatgtaagagataattctttgagggtc
cctagtactgaaaaaggcagagttgttgatgtaaggatatatacccgagaacaaggagac
gaattaccccctggcgccaatatggtggtaagggtatacgttgctcaaagacgtaagatt
caagttggcgacaagatggctggacgccatgggaataaagggataatcagtagaattttg
cctcgagaagatatgccttatttaccagatggcactccagttgacattgtattgaatcct
cttggcgtcccgagcagaatgaatgtagggcaggtttttgaactgttaatgggatgggct
gcagctaatcttgattgcagagttaaagtggttccttttgatgaaatgtatggagctgaa
aagtcttatgaaactgttcagctttatctaaaagaagctgctaagcaacctggaaaggaa
tgggtctttaatccagatgatccaggaaaacttttattaagagatggaagaaccggtgag
gcattcgatcaaccagtagcagttggatactctcacttccttaaattggttcatttagta
gatgacaagattcatgctcgttctacaggtccttattctttagttactcaacagcctctt
ggaggaaaagctcaacaaggtggacaaagattgggtgaaatggaagtttgggcattagag
gcatatggtgcagcatatacattgcaagaattgctcactgttaaatcggatgatatgcaa
ggtaggaatgaggccttgaatgcaatagttaaaggtaaacctatcccgagaccaggcact
cccgaatcattcaaggttttaatgcgagaacttcaatccctaggattagatattggtgtt
tatacagatgaaggtaaagaagttgatttaatgcaagatgttaatcctcgaagaagtaca
ccaagtaggccaacctatgaatctctaggttctgattatcaagaggattaa
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