Pseudoalteromonas marina: CPA52_07210
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Entry
CPA52_07210 CDS
T06578
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pmaa
Pseudoalteromonas marina
Pathway
pmaa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPA52_07210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmaa03400
]
CPA52_07210
Enzymes [BR:
pmaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CPA52_07210
DNA repair and recombination proteins [BR:
pmaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CPA52_07210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
FTSW_RODA_SPOVE
Motif
Other DBs
NCBI-ProteinID:
ATG58035
LinkDB
All DBs
Position
complement(1547426..1548232)
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AA seq
268 aa
AA seq
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MKVISFNINGLRARLHQLQAVIDKHQPDVIGLQEIKVHDEAFPLDDVQKMGYHVYFHGQK
AHYGVAMLCKKEPKSVLKGFATDTEESQKRMISVTIEQDNGRDITVMNGYFPQGDNINHE
TKFPYKRQFYKDLMTHLDTNLTPDQDVVVMGDINISPTDLDIGIGEVNAKRWLKTGKCSF
QPEERQWLSTLLDWGFKDTFRELYPDVNDQYSWFDYRSKGFLDNRGLRIDVVLATQSLAE
RCIDSGIDYELRAIDKPSDHAPIWSTFK
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgatttctttcaatatcaatggtctgcgtgctcgtcttcaccaattacaagct
gttattgataaacatcaaccagacgtaattggcttgcaagagattaaagttcatgatgaa
gcgtttccattagacgatgttcaaaaaatggggtaccacgtctactttcacggtcaaaaa
gcacattacggcgtagctatgttatgcaaaaaagagccaaaatcggtcttaaaagggttt
gctaccgacacagaagagtcgcaaaagcgcatgatcagtgtcactattgaacaagataac
ggtcgcgacattaccgttatgaatggttatttcccgcaaggcgataacatcaatcacgaa
actaaattcccctataaacgtcaattttataaagatttgatgacacatctagatacaaac
ctcactcccgatcaggatgtagttgttatgggcgacataaatatatcacctacagattta
gacataggtattggcgaggtcaacgctaaacgctggctaaaaacaggtaagtgctctttc
caaccagaggaacgtcaatggctatcaacacttttagattggggatttaaagataccttc
agagagctctatcctgatgttaacgatcaatactcatggtttgattaccgctctaaaggc
tttttagataatcgcggtctgcgaattgatgttgtacttgcaactcaatcacttgctgag
cgttgtattgactcaggaattgactatgagctgcgtgcaattgataaaccatcagatcat
gcgccaatttggtcaacgttcaagtag
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