Pseudoalteromonas marina: CPA52_10710
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Entry
CPA52_10710 CDS
T06578
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
pmaa
Pseudoalteromonas marina
Pathway
pmaa00540
Lipopolysaccharide biosynthesis
pmaa01100
Metabolic pathways
pmaa01250
Biosynthesis of nucleotide sugars
Module
pmaa_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmaa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CPA52_10710
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pmaa01005
]
CPA52_10710
Enzymes [BR:
pmaa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
CPA52_10710
Lipopolysaccharide biosynthesis proteins [BR:
pmaa01005
]
Lipid A
CPA52_10710
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
LNYV_PP_C
Motif
Other DBs
NCBI-ProteinID:
ATG58670
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All DBs
Position
complement(2319741..2320595)
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AA seq
284 aa
AA seq
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MKDQIIKINEIELANNKPFVLFGGMNVLESRDLAMRIAEHYVEVTTKLNIPYVFKASFDK
ANRSSINSYRGPGMEEGLKIFEEIKNTFNIPLITDVHEPHQAAPVAEVVDVIQLPAFLAR
QTDLVVAMAKTGAIINVKKPQFLAPHEMRHIITKFNEAGNNNIALCERGSSFGYNNLVVD
MLGMDDMKAMAPVIFDATHALQRPGGRADSADGRRAQAAELARSGMALGIAGLFIEAHPN
PNEAKCDGPCALALSKLEGYLSQMKAVDDLVKSFAPLDTSASDL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatcaaattatcaaaattaatgaaattgaattagcaaacaacaaaccgtttgtt
ttatttggtggtatgaacgttttagaatcgcgcgatttagccatgcgcattgcagagcat
tatgtagaagtgacgacaaagctaaacataccatatgtgtttaaagcatcatttgataaa
gctaatcgttcttcaatcaactcgtaccgtggtccgggaatggaagaagggttaaaaata
tttgaagaaattaaaaacaccttcaatattcctcttatcactgacgttcacgaaccgcat
caagcggcgccggttgctgaagtggttgatgttattcagttgcctgcttttttagcccgt
caaacagacctagttgttgctatggcaaaaacaggtgcgattatcaatgttaaaaagccg
caatttttagcaccacatgaaatgcgccacatcattactaaatttaatgaggctggtaat
aataatattgcactttgtgagcgtggctctagctttgggtataataacctggttgttgat
atgttaggtatggatgacatgaaagcaatggcacccgttatttttgatgcaacgcatgcg
ctgcaacgcccaggtggtcgtgcagattcagctgatgggcgtcgagctcaagcggcagag
ttagccagaagtggaatggctttggggatcgctggtttatttatcgaagcacatccaaac
cctaatgaagcaaagtgtgatggaccatgtgcattagccctaagcaaattagaaggctat
ctatcgcaaatgaaagcggtagatgatttggttaagagttttgcgccgttagataccagc
gctagcgacttataa
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