Prauserella marina: BAY61_02695
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Entry
BAY61_02695 CDS
T04988
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pmad
Prauserella marina
Pathway
pmad03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BAY61_02695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmad03021
]
BAY61_02695
03400 DNA repair and recombination proteins [BR:
pmad03400
]
BAY61_02695
Enzymes [BR:
pmad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BAY61_02695
Transcription machinery [BR:
pmad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BAY61_02695
DNA repair and recombination proteins [BR:
pmad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BAY61_02695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
RnfC_N
TrbE
Motif
Other DBs
NCBI-ProteinID:
ASR34074
LinkDB
All DBs
Position
624200..627691
Genome browser
AA seq
1163 aa
AA seq
DB search
MAVSPANQATAATNSAEKSTGIPGAPKRVSFAKIREPLSTPNLLDVQIRSFEWFTGSEAW
FELRVNEGDESPVGGLEEVLNEISPIEDFSGSMSLSFSDPRFDEVKASVEECKDKDMTYA
APLFVTAEFVNNNTGEIKSQTVFMGDFPVMTDKGTFIINGTERVVVSQLVRSPGVYYDQA
VDKTTDKDVFSVKIIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTTEAIRE
RFSFSETLLATLEKDHTAGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKDKRYDLAK
VGRYKINKKLGLGLPYDTGTLTEEDIVTTIEYLVRLHAGEETMKAHDVEVPVETDDIDHF
GNRRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKEFFGT
SQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGMDVRDVHPSHYGRMCPIETPEGPN
IGLIGSLCSYARVNPFGFIETPYRKVVEGRVTDQVDYLTADEEDRFVKAQANAPIGDDGH
FIEESVLGRRKGGEVELIDPLEVDYMDVSPRQMVSVATGMIPFLEHDDANRALMGANMQR
QAVPLLRNESPLVGTGVELTAAVDAGDVLVAEQAGVVEELSADMVTIMHDDGTRKSYGLY
KFRRTNAGTCFNHRPVVSEGDRVEQGQVIADGPSTDKGEMALGKNLLVAVMPWEGHNYED
AIVISQRLVQDDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSEDVLADLDERGIIRIG
AEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGKVIGIRVF
SREDDDELPPGVNELVRVYVAKKSKIQDGDKLAGRHGNKGVIGKILPVEDMPFMEDGTPV
DIVLNTHGVPRRMNIGQILELHLGWLASQGWQVEGAPDWAKNLSEDLRNVEPGTNTATPV
FDGAKEEELMGLLSCTKPNRDGDRMVGPEGKAVLLDGRSGEPFPYPVSVGYMYILKLHHM
VDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIKSDDV
LGRVKVYEAIVKGENMPSPGIPESFKVLLKELQSLCLNVEVLSSDGAAIEMRDSDDEDLE
RAAANLGINLSRNESPSVDDVVQ
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
ttggcagtctctcccgcgaaccaggccactgctgcgaccaactcggctgagaagtcaacg
ggaatcccaggagcacccaagcgggtatctttcgcgaagatccgcgaaccgctgagcact
cccaacctgcttgacgtgcagattcggtcattcgaatggtttaccggctcggaggcgtgg
tttgaactccgcgtcaacgagggcgacgaaagcccggtcggtggtcttgaagaggtcctc
aacgagatctcaccgatcgaggacttctccggatcgatgtccctgtctttttccgatccg
cgcttcgacgaggtgaaagcctcagtcgaggagtgcaaggacaaggacatgacctacgcg
gcgccgttgttcgtcaccgccgagttcgtcaacaacaacaccggcgagatcaagagccag
acggtcttcatgggtgacttccccgtgatgaccgacaagggcactttcatcatcaacggc
accgagcgcgtcgtcgtctcgcagctcgtccgttcgccgggtgtgtactacgaccaggcc
gtcgacaagacgaccgacaaggacgtcttcagcgtcaagatcatcccgagccgtggtgcg
tggctcgaattcgatgtcgacaagcgcgacaccgtcggcgtgcgcatcgaccgcaagcgg
cggcagccggtcacggtgctgctgaaggcgcttggctggaccaccgaggcgatcagggag
cgcttctcgttctccgagacgctgctcgccacgcttgagaaggaccacacggcggggacc
gacgaggcgctgctcgacatctaccgcaagctgcgtcccggtgagccgccgacgaaggag
agcgcacagacgctcctggagaacctgttcttcaaggacaagcgctacgacctcgccaag
gtcggtcgttacaagatcaacaagaagctcggtctcggccttccctacgacaccggcacg
ctgaccgaagaggacatcgtcaccaccatcgaatacctcgtccgcctgcacgcgggcgag
gagacgatgaaggcgcacgacgtagaggtgcccgtcgagaccgacgacatcgaccacttc
ggcaaccgtcgcctgcgcaccgtcggcgagctgatccagaaccagatccgggtcggcctt
tcccgcatggagcgcgtcgtccgcgagcggatgaccacccaggacgtcgaggcgatcacg
ccgcagaccctgatcaacatccgtcccgtcgtggccgcgatcaaggagttcttcggaacc
tcccagctctcgcagttcatggaccagaacaacccgctttcgggcctgactcacaagcgc
cgcctctcggcgctcggccccggcggtctctcccgtgagcgcgcgggcatggacgttcgc
gacgtgcaccccagccactacggccggatgtgcccgatcgagacgccggaaggcccgaac
atcggtctgatcggctcgctgtgctcctacgcgagggtcaacccgttcggtttcatcgaa
accccctaccgcaaggtcgtcgagggcagggtcaccgaccaggtcgactacctcacggcc
gacgaggaagaccgcttcgtcaaggcgcaggccaacgcgcccatcggcgacgacgggcac
ttcattgaggagagcgtcctcggtcgtcgcaagggcggcgaggtcgagctgatcgacccg
cttgaggtcgactacatggacgtgtcgcctcggcagatggtctccgtcgccaccggcatg
atcccgttcctcgaacacgacgacgccaaccgtgccctgatgggcgcgaacatgcagcgt
caggccgttccgctgctgcggaacgagtcgccgctcgtcggtaccggcgtggagctcacg
gccgccgtcgacgcgggtgacgtactcgtcgccgagcaggccggtgtcgtcgaggaactc
tcggccgacatggtcacgatcatgcacgacgacggcacgcggaagagctacggactgtac
aagttccgtcgcaccaacgcgggcacctgcttcaaccaccgtcccgtcgtcagtgagggc
gacagggtcgagcagggccaggtcatcgccgacggtccctcgaccgacaagggcgagatg
gcgctcggcaagaacctgctcgtcgcggtcatgccgtgggaaggccacaactacgaggac
gccatcgtcatctcgcagcggctggtccaggacgacgtgctcacctcgatccacatcgag
gagcacgagatcgacgcccgcgacaccaagctcggtgccgaggagatcacgagggacatc
ccgaacgtctccgaggacgtgctcgccgacctcgacgagcgcggcatcatccgcatcggt
gccgaggttcgtgacggcgacatcttggtcggcaaggtcacgccgaagggcgagaccgag
ctgacccccgaggagcggctgctccgcgcgatcttcggcgagaaggcgcgcgaggtccgt
gacacctcgctcaaggtgccgcacggcgagaccggcaaggtcatcggtatcagggtcttc
tcccgcgaggacgacgacgagctgccccccggcgtcaacgagctcgtccgcgtctacgtg
gcgaagaagagcaagatccaggacggcgacaagctcgccggacgacacggcaacaagggc
gtcatcggcaagatcctgccggtcgaagacatgccgttcatggaggacggcactccggtc
gacatcgtgctgaacacccacggtgtgccgcgaaggatgaacatcggccagatcctcgaa
ctgcacctcggctggctcgcctcccagggctggcaggtcgagggtgctccggactgggcg
aagaacctctccgaggatcttcggaacgtcgagccaggcacgaacaccgcgaccccggtg
ttcgacggcgccaaggaagaggagctcatggggctgctctcctgcacgaagccgaaccgc
gacggcgaccgcatggtcggccccgagggcaaggcagtgctgctcgacggacgttccggc
gagccgttcccgtacccggtgtcggtcggctacatgtacatcctgaagctgcaccacatg
gtggacgacaagatccacgccaggtcgacgggtccgtactcgatgatcacccagcagccg
cttggtggtaaggcacagttcggtggccagcgcttcggtgagatggagtgctgggcgatg
caggcctacggcgcggcatacacgctgcaagagctgctcaccatcaagtccgacgacgtg
ctcggccgcgtgaaggtctacgaggcgatcgtcaagggcgagaacatgccgtcgccgggt
atcccggagtcgttcaaggtgttgctgaaggaattgcagtcgctgtgcctcaacgtcgag
gtgctctccagcgacggagccgcgatcgagatgcgcgactccgacgacgaggacctcgaa
cgcgccgcggcgaacctcggcatcaacctgtctcgcaacgagtcaccatcggttgatgac
gtcgtccagtaa
DBGET
integrated database retrieval system
