KEGG   Prauserella marina: BAY61_06400
Entry
BAY61_06400       CDS       T04988                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
pmad  Prauserella marina
Brite
KEGG Orthology (KO) [BR:pmad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmad03032]
    BAY61_06400
   03036 Chromosome and associated proteins [BR:pmad03036]
    BAY61_06400
   03400 DNA repair and recombination proteins [BR:pmad03400]
    BAY61_06400
DNA replication proteins [BR:pmad03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BAY61_06400
Chromosome and associated proteins [BR:pmad03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    BAY61_06400
DNA repair and recombination proteins [BR:pmad03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      BAY61_06400
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF1869
Other DBs
NCBI-ProteinID: ASR34670
UniProt: A0A222VL66
LinkDB
Position
1412743..1413417
AA seq 224 aa
MANKAQLIEALSERLGDKKVASQAVDNLVDIIIRTVNKGEKVNITGFGVFEKRARAARTA
RNPRTGETVRVKKTNVPAFRAGTTFKDVVSGAKKLPKATTAKRATASSSARSTGTTTRAA
ASRPTATRSTTTRTRATTARSTSRTATKAAPKTASRTAAKTTAKTATKAAPKSTAKATTA
KASTAKKTTAKATKATTKAAPKAAAKKTTTAAAKKTTTAARKKK
NT seq 675 nt   +upstreamnt  +downstreamnt
atggccaacaaggcccaactgatcgaggcgctctccgagcgcctgggcgacaagaaggtc
gcgtcgcaggctgtcgacaaccttgtcgacatcatcatccggacggtgaacaagggcgag
aaggtgaacatcaccggcttcggtgtgttcgagaagcgcgctcgcgctgcccgtaccgcg
aggaacccgcggaccggcgaaaccgtgcgcgtcaagaagaccaacgtcccggccttccgt
gccggcacgaccttcaaggacgtcgtcagcggtgcgaagaagctgccgaaggccaccacg
gccaagcgggcgaccgcgagcagcagcgccaggagcaccggcacgacgacgagggcggcc
gccagccgtccgaccgcgacgcgcagcacgaccacccgtacccgcgcgacgacggctcgc
agcacgagccgtaccgccaccaaggcggctccgaagacggcgtcgaggaccgcggccaag
accacagccaagaccgccaccaaggcggcaccgaagtcgactgcgaaggcgacgaccgcg
aaggcgtcgaccgcgaagaagacgacggcgaaggcaaccaaggcgacgacgaaggcggct
ccgaaggccgcggcgaagaagaccaccaccgccgctgccaagaagaccaccaccgctgcc
aggaagaagaagtag

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