Paraperibacillus marinus: V1498_21355
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Entry
V1498_21355 CDS
T11218
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pmaf Paraperibacillus marinus
Pathway
pmaf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V1498_21355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmaf03400
]
V1498_21355
Enzymes [BR:
pmaf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
V1498_21355
DNA repair and recombination proteins [BR:
pmaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V1498_21355
Prokaryotic type
V1498_21355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XNZ80339
LinkDB
All DBs
Position
complement(4246079..4246750)
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AA seq
223 aa
AA seq
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MLGQTINNDWGELLQGEFQKPYFAALEEFLQIEYAEQTIYPAKNDIFNALRYTPFQNVKA
VILGQDPYHGPDQAQGLSFSVKPGVTLPPSLKNIFKELHQDCGCNIPKDGSLIKWAEEGV
LMLNTVLTVRKGNAHSHKGRGWENFTNEVIRLLNSKETGVVFILWGIPAQSKLELIDTDK
HHVITSPHPSPFSANKGFFGSRPFTKTNEALGKEGQQKIDWCL
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcttggacagacaataaataatgattggggagagctgctgcagggggagtttcagaaa
ccttattttgcagcgcttgaggaatttcttcagatagagtacgcggaacaaacgatatat
ccggctaaaaatgatattttcaacgccctccgctataccccgtttcagaatgttaaggct
gtcatcctggggcaggatccctaccacgggccggaccaggcacaaggcttgagtttttca
gtaaagccgggtgtcaccctgcctccgtctttaaagaatatattcaaagaactgcatcag
gattgcggctgtaatattccaaaggatggatcactgatcaaatgggccgaagaaggtgtc
cttatgctgaatacggtgctcacagtacggaaggggaacgcgcactcccacaaagggaga
ggatgggagaacttcacaaatgaggtgatcaggctgctgaactcaaaagaaacgggtgta
gtcttcatactttggggcatacctgcgcaaagtaagctggaactcattgataccgataag
catcatgttattacctccccgcatccaagcccattttcggcgaacaaaggctttttcgga
agccggcccttcacgaagacgaacgaggcgctcgggaaagagggacagcagaaaatagat
tggtgtctttaa
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