Parus major (Great Tit): 107205854
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Entry
107205854 CDS
T04864
Symbol
IRF7
Name
(RefSeq) interferon regulatory factor 7 isoform X2
KO
K09447
interferon regulatory factor 7
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04620
Toll-like receptor signaling pathway
pmaj04621
NOD-like receptor signaling pathway
pmaj04622
RIG-I-like receptor signaling pathway
pmaj04623
Cytosolic DNA-sensing pathway
pmaj05164
Influenza A
pmaj05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107205854 (IRF7)
04621 NOD-like receptor signaling pathway
107205854 (IRF7)
04622 RIG-I-like receptor signaling pathway
107205854 (IRF7)
04623 Cytosolic DNA-sensing pathway
107205854 (IRF7)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
107205854 (IRF7)
05168 Herpes simplex virus 1 infection
107205854 (IRF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaj03000
]
107205854 (IRF7)
Transcription factors [BR:
pmaj03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
107205854 (IRF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
107205854
NCBI-ProteinID:
XP_018862540
Ensembl:
ENSPMJG00000009810
LinkDB
All DBs
Position
5:17311736..17319340
Genome browser
AA seq
525 aa
AA seq
DB search
MAAAEKEGEAQRLRFGQWLLNAISSGNYRGLRWIDSAHTIFRVPWKHNARKDITSSDLEV
FKAWAKVSGRYEEGSEDPAKWKTNFRCALSSTHMFKLEQDHSKRGDDPHKVFSIVSATLQ
HSTEGDSSIPNPVVDEQAAQEQLQLELHSQDMASAIAVPESTDPTQLKTLEDLLQHCDIS
PRVLGPLTAPWVPTGGFSAGNTPHQDIVLQPHQDIVLQPHQDTLLQPYTNTSQNSCFPPT
TFPQWVPTVEQPTLDTYQATGLMPPQETGAVPAPCHLMEGTVPMQYAAEATLFVPAASPV
PQPRLLLDNTDGIVSILDVTIYYRGKEFHREVVGGSRCLLTYQPPSLPESPCPWHVVHFP
SPASVADSKQRRITEELLGVAGLQLEQRAYKVFATRREKCKVFWALSQQLEGVEEPPPNL
LYRDQETPIFDFNEFCTELRDFRNGQRRRSPDFTIYLCFGQAFSKTKPKESKLILVKLVP
KFCEYYYDQVLQEGASSLDSHTISLQLSNSFDLMELIEQYNMQLG
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcggagaaggagggggaagcgcagaggctgcggttcggacagtggctgctg
aacgccatcagcagcgggaactaccgggggctgcgctggatcgactctgcccacaccatc
ttccgcgtcccctggaaacacaacgccaggaaagacatcaccagcagtgacctggaggtc
ttcaaggcctgggcaaaggtcagtgggcgctatgaggaaggctctgaggacccggccaag
tggaagaccaacttccgttgtgccctgagcagcacacacatgttcaagctggaacaggac
cattccaagcgtggtgatgacccccacaaggttttctccattgtctcagccaccctccag
cacagcacggagggagattccagcatcccaaaccctgtggtggacgagcaggcagcacaa
gagcagctgcagctggagctccactcccaagacatggcctcagcaatcgctgtgccagaa
agcaccgaccccacacagctcaagactctggaggacctgctgcagcactgtgacatctct
ccccgtgtccttggcccgctcactgcaccctgggtgcccacaggtggcttctctgcaggg
aacactccccaccaggacattgtgctccagcctcaccaggacattgtgctccagcctcac
caggacaccctgctccagccttacacaaacaccagccaaaacagctgcttccctcccacg
acatttccacaatgggtgcccacggtggagcagcccaccttggacacctaccaagcaacg
ggcctcatgccaccacaagagacaggggccgtgccagcaccatgtcacctgatggagggc
acggtccccatgcagtacgcggcggaggcgacgttgttcgtgcctgccgccagtcctgtg
ccacagccacggctgctgctggataacacagatggcatcgtctccatcctggatgtcacc
atctactaccgggggaaggagttccaccgggaggtggttgggggcagccgctgcctgctg
acgtaccagccccccagtctgccggagagcccgtgcccctggcacgtggtgcacttcccc
agccccgccagcgtggccgacagcaagcagcggcgcatcaccgaggagctgctgggcgtc
gcggggctgcagctggagcaacgcgcctacaaggtctttgctacccgccgggagaagtgc
aaggtgttctgggccttgtcccagcagctcgagggggttgaggagcctccacccaacctg
ctctaccgggaccaggaaacgcccatctttgacttcaatgagttttgcacagagctgagg
gacttccgcaatggccaaaggcggcgatcccccgacttcaccatctacctctgctttggg
caggccttctccaagaccaagcctaaggagtccaagctcatcctggtcaagctggtgccc
aagttctgcgagtattactacgatcaggtgctgcaggagggagcctcctccctggacagc
cacaccatcagcctgcagctctccaactcctttgacctcatggaactcattgagcagtac
aacatgcagctgggctga
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