Parus major (Great Tit): 107209427
Help
Entry
107209427 CDS
T04864
Symbol
CHSY1
Name
(RefSeq) chondroitin sulfate synthase 1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pmaj01100
Metabolic pathways
Module
pmaj_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
107209427 (CHSY1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pmaj01003
]
107209427 (CHSY1)
Enzymes [BR:
pmaj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
107209427 (CHSY1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
107209427 (CHSY1)
Glycosyltransferases [BR:
pmaj01003
]
Glycan extension
O-Glycan
107209427 (CHSY1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
107209427
NCBI-ProteinID:
XP_015494652
LinkDB
All DBs
Position
10:complement(17325100..17402487)
Genome browser
AA seq
711 aa
AA seq
DB search
MTAQKYLRSRAVAAHRTWSKTIPGKVEFFSSEGSDTSIPIPIVPLPGVDDSYPPQKKSFM
MLKYMHDHYLDKYEWFMRADDDVYIKGDKLENFLRSLNSSEPLFLGQTGLGTTEEMGKLA
LEPGENFCMGGPGVIMSREVLRRMVPHIGECLREMYTTHEDVEVGRCVRRFAGVQCVWSY
EMQQLFYENYEKNKKGYIRDLRNSKIHRAITLHPNKNPPYQYRLHSYMLSRKIAELRHRT
VQLHREIVLMSKYSNTEIHKEDLQLGMPPSFMRFQPRHREEILEWEFLTGKYLYSGADGQ
PPRRGMDSSQREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYRRVNPMYGAEYVLDL
LLLYKKHKGKKMTVPVRRHAYLQQTFSKIQFMEHEEMDAKELASKINQDSGSLSFLSNSL
KMFVPFQLSRSKAERKELKDKKINILIPLSGRFDMFARFMGNFEKTCLIPNQNVKLVVLL
FNSNSNPDKAKQIELMRDYRSKYPKADMQVLPVSGEFSRALALEVGSSQFQNESLLFFCD
VDLVFTTEFLQRCRANTVLGQQVYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNY
GFGITCIYKGDLLQAGGFDVSIQGWGLEDVDLFNKVIQAGLKTFRSQEIGVVHVHHPVFC
DPNLDPKQYKMCLGSKASTYGSTQQLAEIWFEKNDPNFGKSSNTNGSVRTA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgcagaagtacctgcggagccgcgccgtggccgcgcaccgaacgtggtccaaa
accattcctggcaaggtcgaattcttctccagcgagggctcggacacctctatccccatc
cccatcgtgccgcttccaggtgtcgatgactcctaccccccccagaagaaatccttcatg
atgctcaaatacatgcatgaccactacttggacaaatacgaatggtttatgagggctgac
gacgacgtttacatcaaaggggacaaactggagaacttcctcaggagcctgaacagcagc
gagccgctgttcctggggcagaccggcctcggcaccacggaggagatggggaagctggcg
ctggagccgggtgagaacttctgcatgggggggccaggagtgatcatgagccgggaggtg
ctgcggaggatggtgccccacatcggcgagtgcctgcgggagatgtacaccacccacgag
gacgtggaagtgggacgctgcgtgcggaggttcgcgggggtgcagtgtgtctggtcctac
gagatgcagcagctgttctacgagaactacgagaagaacaaaaaaggctacatccgagac
ctgaggaacagcaaaatccaccgagccataacgctgcaccccaacaagaaccccccgtac
cagtacaggctgcacagctacatgctgagccgcaagatcgctgagctgcgccatcgcacc
gtgcagctgcaccgcgagatcgtgctcatgagcaagtacagcaacaccgaaatccacaag
gaggacctgcagctggggatgccgccctccttcatgcggttccagccccgccacagggag
gagatactggagtgggagttccttacaggaaaatatttgtattctggtgctgacgggcag
ccgcctcggagagggatggactcgtcccagcgcgaggcgttggatgacatcgttatgcag
gtcatggaaatgatcaacgccaacgccaagacgcgggggagaatcattgatttcaaggaa
attcagtatggataccgcagggtgaaccccatgtatggagcagagtacgtgctggacctg
ctgcttctctacaagaagcacaaggggaagaagatgacggtccccgtgaggaggcacgcg
tacctgcagcagaccttcagcaagatccagttcatggagcacgaagagatggacgccaaa
gagctggccagcaaaatcaaccaggattctgggtccttgtccttcctctccaactcgctg
aagatgtttgtccctttccagctcagcaggtccaaagcagaaaggaaggagctcaaagac
aagaagatcaacatcctgatccctctctccggacggtttgacatgtttgcaaggttcatg
gggaattttgaaaagacgtgcctcattccaaaccagaacgtcaagctggttgttctgctt
ttcaattccaactccaaccctgacaaagcgaagcagatcgagctgatgagagattaccgc
tccaaataccccaaggctgacatgcaggttctgccggtgtcgggggagttctcaagggca
ctggctctggaagtcggatcttctcagttccagaacgagtctttacttttcttctgtgat
gttgacttagtgtttaccacagaattcctccagcggtgtagagccaatacagttttgggt
cagcaagtatattttcccatcatttttagccagtatgatccaaagattgtttatagtgga
aaggttcctagtgacaatcattttgccttcactcagaaaacaggtttctggaggaactat
ggctttggtatcacctgtatttacaaaggtgacctgcttcaagcgggtggctttgatgtc
tccatccaaggttggggccttgaagacgtagatctgtttaacaaagtcattcaagctggc
ttaaaaactttcagaagccaagaaattggagtagtccatgtgcatcaccctgttttttgt
gaccctaatcttgatccaaaacaatataaaatgtgcttggggtccaaagcttcaacttat
gggtccacacaacagctggcagaaatatggtttgaaaaaaacgacccaaattttgggaaa
agcagcaatactaatggctcagtgaggacagcctaa
DBGET
integrated database retrieval system
