Parus major (Great Tit): 107209644
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Entry
107209644 CDS
T04864
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
107209644 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmaj04040
]
107209644 (CNGB1)
Ion channels [BR:
pmaj04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107209644 (CNGB1)
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
107209644
NCBI-ProteinID:
XP_033373171
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Position
11:6227105..6256811
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AA seq
1243 aa
AA seq
DB search
MMGWIDRVVPQPPVPHVAEETPVQELEPAKAPTGKASGPTDVADRARTEETEKKVTFVVS
EDSSSVFDSVGSSVLSWLSYGLEKVIPQPAPAPGLQALGKSFETSIDIADETEVQVLGDE
DDDGLEITPFDPEEDVSEGEAEPGPQEWAGNRVLSWLSQGFERILPQPEGMKKLETEQKE
KSEGAVEDTKGTKTQEKSKCSAPAEEKAAAAKGQPQPVATPSPRPTAVDGGRMFSWFVQG
LEKVMPQPVTREKQDTQGVATATSSPVEQIHVAPGEQEETHPVLKEIDDGQINEEVAARA
HGAELEAEAHSLPTIQEEPQEEENRLCLGSPNVTKGEEEKEEEEKKEEEEERKKEEEDKR
KKEEEEMKPLLQPPCLPADKAVDEACLAEEALRVEQLEEVEISNLQGALVQQAPSSMARR
ARDVELDRLVHGQAVAGRDRSSPGRGALEQLPNVPSYRASAAARTPGPAASKPKAGVVNP
NFCTEEQSPLGNYPTVEIKDVDSPGHAVEIHGTHGPVPAAGAPNLLAVPGAASPRRKQLL
PEDGLDEGLVSQSPRPVLGWDEEQRESLPQRIGSATSLSSAVINTRLQELVRLFKERTEK
VKEKLIDPDVTSDDESPVASPTKPAPAAAPVPAPGGELEGDKPSGDDHYCEMLCCTFKHR
PWLDHLKSYQFPSSIDPLTNLMYVLWLFFVVMAWNWNCWLIPVRWAFPYQTPANIHYWLL
VDYLCDLIYLLDILIFQTRLQFVQGGDIITDKKAMKENYLRSQRFKMDVLCLLPLDFLYF
KVGVNPLLRFPRCLKYMAFFEFNNRLEAILTKAYIYRVIRTTAYLLYSLHVNSCLYYWAS
AYEGLGSTTWVYDGEGNSYIRCYYWAVKTLITIGGLPDPKTLFEIVFQLLNYFTGVFAFS
VMIGQMRDVVGAATAGQTYYRSCMDSTIKYMNFYKIPRTVQNRVKTWYEYTWHSQGMLDE
SELLVQLPDKMRLDIAIDVNYNIVSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYVCKKG
EIGREMYIIQAGQVQVLGGPDGKSVLVTLKAGSVFGEISLLAAGGGNRRTANVVAHGFAN
LFILEKKDLNEILVHYPESQKLLRKKAKKMLKSNNKPKDEKGGPGDALIIPPKAETPKLF
KAALAATGRMGGKGPLGRLRWRLKELKAMQETQVSVVSPTPPKSPVHQRSPAMSHRAQTC
PGEEISSESYDHSVTIRVISTAKEEEEILAAEISEKDEKKEEK
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgatgggctggattgaccgggtggtgccccagcccccggtgccccacgtggcagaggag
acccctgtgcaggagctggagccagctaaggcaccaacaggaaaggccagtggtcccaca
gatgttgctgaccgggcacgcactgaggaaacggaaaagaaagtgacctttgtggtctct
gaggactcgagttctgtgttcgacagtgtggggagtagtgtgctctcctggctctcctat
gggctggagaaggtgattccccagccagccccagccccagggctgcaggcactcgggaag
agctttgagacaagcatcgacattgctgatgagacagaggtccaggtccttggggatgag
gacgacgatggtctggagataactcccttcgatcccgaggaggacgtctccgagggcgaa
gcggagcccggcccgcaggagtgggcaggaaaccgggtgctcagctggctgtcacagggc
ttcgagaggattttgccgcagccagaggggatgaaaaagctggagacagagcagaaggag
aagagcgaaggagcagtggaagacactaaagggactaaaacccaggagaaatccaaatgc
agcgctccagccgaggagaaggcagcagcagccaaggggcagccgcagcccgtggccacc
cccagccctcggcccacggctgtggatggcggcaggatgttcagctggtttgtccagggg
ctggagaaggtgatgccgcagccggtgaccagggagaagcaggacacgcagggagtggcc
acagcaacctcaagtcctgtggaacaaattcatgtagcccctggggaacaggaggaaact
catcccgtcctgaaagagattgatgatggccagattaacgaagaggtggcggcccgggct
cacggggctgagctggaggcagaagctcattccctccccaccatacaggaggaacctcag
gaagaggaaaacagactgtgcttgggctccccaaatgtgaccaagggggaagaggaaaag
gaggaggaggagaaaaaagaggaggaggaagagaggaagaaagaggaggaagacaagagg
aagaaagaggaagaggagatgaaacccctgctgcagccgccttgtctccctgctgataag
gctgtggatgaagcctgtcttgctgaggaggccctcagggttgagcagctggaagaagtt
gagataagtaatctccaaggtgctcttgtgcagcaggctcctagcagcatggccaggcgg
gcccgggacgtcgagctagaccggctggtgcatggccaggctgtggctggcagggaccgc
tcctctcccggccgtggggctctagagcagctccccaatgtccccagctaccgagccagc
gccgccgcccgcacccccggccctgccgccagcaagccaaaggctggagttgtcaacccc
aatttttgcactgaggagcaatccccactaggaaattaccccaccgtggagatcaaggat
gtggacagcccaggccatgctgtggagatccatggtacccatggaccggtgcctgctgcc
ggcgctcccaacctgctggcggtgcccggtgcagcatcccccaggaggaagcaactgctc
ccagaggatggtctggacgaggggctggtgagccaatcccccaggccagtgctgggctgg
gatgaggagcagagggaaagcctgccccagcgcatcggctcggccacgagcctgagcagc
gccgtcatcaacactcggctgcaggagctggtgaggctcttcaaagagaggacagagaag
gtgaaggagaagctgattgaccccgatgtcacctcggacgacgagagccctgtggcatct
cccaccaagccagcacctgcagcagcaccggtgcctgccccaggaggagagctggagggg
gacaaaccctcgggggatgaccactactgtgagatgctgtgctgcacattcaagcaccgg
ccctggctggaccacctgaagagctaccagttccccagcagcattgaccccctgaccaat
ctgatgtacgtgctgtggctgttcttcgttgtcatggcctggaactggaactgctggttg
atccctgtccgctgggctttcccctaccagactccagcaaacatccactactggctgctg
gtggactacctctgtgacctcatttatctgctggacatcctcatctttcagacccggctg
cagttcgtgcaggggggagacatcatcactgacaaaaaggccatgaaagagaactacctg
cgatcacaacgcttcaagatggacgtgctgtgcctcctgcccctggatttcctctacttc
aaagtgggtgtcaaccccctgctgcgcttccctcgctgtctgaagtacatggccttcttt
gagttcaacaaccgcctggaggccatcctgaccaaggcttacatctacagggtgattcgg
accactgcctacttactgtacagcctgcacgtgaactcctgcctctactactgggcctca
gcctatgaaggactgggttccaccacctgggtctatgatggggaaggaaacagctacatc
cgctgttactactgggcagtgaaaaccctcatcaccatcgggggcctgccagaccccaag
acgctgtttgagatcgtcttccagctgctgaactacttcacaggagtctttgctttctcc
gtcatgatagggcagatgagagacgtggttggtgctgcgactgcagggcaaacttactat
aggagctgcatggacagcaccattaaatacatgaacttctacaagatccccagaactgtt
cagaaccgggtgaagacgtggtacgagtacacgtggcactcccaaggcatgctagatgag
tcagagctgctggtgcagctgccagacaagatgaggctggacatcgctatcgatgtgaac
tacaacatcgtgagcaaagtggcccttttccagggctgtgacagacagatgatctttgac
atgctgaagcggctcagatcagtggtctacctgcccaatgactacgtgtgcaagaaggga
gaaataggccgtgagatgtacatcatccaggcgggacaagtgcaggtgctggggggaccc
gacggcaaatccgtgctggtgactctgaaagctggatctgtctttggggaaatcagcttg
ctggcagcaggagggggaaatcgccggacagcaaacgtcgtggcccacggctttgccaac
ctttttattttggagaagaaggacttgaacgagattttggtgcattacccggagtctcag
aagctgctgcgcaagaaggccaagaaaatgctgaaaagcaacaacaaacccaaagatgag
aaaggaggccccggagatgcgctgatcatccccccgaaagctgagaccccaaagctgttc
aaggctgccctggctgccacggggaggatggggggcaaagggcccctggggcggctccgc
tggaggctgaaggagctgaaggcgatgcaggagacacaggtttccgttgtcagcccaacc
ccaccaaaatcaccagtgcaccagagatcacctgccatgtcccacagagcacaaacctgc
ccaggagaagaaatatcctcagaatcttatgatcattcagtcaccattcgtgtgatttcc
acagcaaaagaagaagaggaaatccttgctgctgagatttcagagaaagatgaaaaaaaa
gaagagaaatga
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