KEGG   Parus major (Great Tit): 107213356
Entry
107213356         CDS       T04864                                 
Symbol
SDC4
Name
(RefSeq) syndecan-4 isoform X1
  KO
K16338  syndecan 4
Organism
pmaj  Parus major (Great Tit)
Pathway
pmaj04512  ECM-receptor interaction
pmaj04514  Cell adhesion molecules
pmaj04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107213356 (SDC4)
   04514 Cell adhesion molecules
    107213356 (SDC4)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107213356 (SDC4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:pmaj00535]
    107213356 (SDC4)
Proteoglycans [BR:pmaj00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   107213356 (SDC4)
SSDB
Motif
Pfam: Syndecan Protocadherin Glycophorin_A
Other DBs
NCBI-GeneID: 107213356
NCBI-ProteinID: XP_015503195
Ensembl: ENSPMJG00000004058
LinkDB
Position
20:5559202..5577801
AA seq 203 aa
MCSGSEPSVKCFWRVVSFLTRLHPHVQVRETETMDAGWLDYPASGDLPDDEDIGEFRPHL
TSDGLDLDETSGSGDYPDSEDGLYLSTVDTPVISDNYIPGDTGRKIEGEKKNTMVDNEII
PDKAVPVEENLSNKISMASTANSSIFERTEVLTALIAGGAVGLLFAIFLILLLVYRMKKK
DEGSYDLGKKPIYKKAPTNEFYA
NT seq 612 nt   +upstreamnt  +downstreamnt
atgtgctcaggctctgaaccttctgtgaaatgcttctggagagttgtgtcgtttttaaca
cgtctccacccccatgtacaggtgagagaaactgaaaccatggatgctggatggcttgac
taccctgcctctggggacttgccagacgatgaagacattggtgaattcaggcctcactta
acctctgatgggttagatctagatgagacatctgggtcaggagactacccagactctgaa
gatggcttgtatctgagcaccgtggataccccagtgatatctgacaactatatccctgga
gatactggcagaaagatagaaggtgagaagaaaaacacaatggtggacaacgaaatcatc
ccagacaaagctgtacctgttgaagagaacctgtccaacaagatctccatggcaagcaca
gccaacagcagcatctttgaaagaacagaagtccttacagctctcatcgcaggaggagca
gtgggtctcctgtttgccatcttcctgatcctgctcttggtctatcgcatgaagaaaaag
gatgagggcagttacgacctggggaagaaacccatctacaagaaagcccccacaaacgag
ttctatgcctaa

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