Parus major (Great Tit): 107213683
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Entry
107213683 CDS
T04864
Name
(RefSeq) interstitial collagenase-like
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
107213683
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmaj01002
]
107213683
Enzymes [BR:
pmaj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
107213683
Peptidases and inhibitors [BR:
pmaj01002
]
Metallo peptidases
Family M10
107213683
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_5
Reprolysin_3
Reprolysin_4
Peptidase_M54
Peptidase_M66
DUF4953
Metallopep
Reprolysin_2
Motif
Other DBs
NCBI-GeneID:
107213683
NCBI-ProteinID:
XP_015503870
Ensembl:
ENSPMJG00000017839
LinkDB
All DBs
Position
1:74608412..74615177
Genome browser
AA seq
466 aa
AA seq
DB search
MKTFVILLSLYVAVSSAFPVAPEAEDEGKTLQLVESYLQNFYDLQRDHHPHVRSSGENPL
TAKLKEMQSFFGLEVTGKPDLDTLEVMKKPRCGVPDVEKYVFTPGNPKWKRNNLTYRILN
YTPKMRRADVDEAIRKALSVWSNVTPLTFQKVEDKEADIMISFAYRDHRDNSPFDGPNGQ
LAHAFQPGEGIGGDVHMDEEEAWTKDGRGYNLFIVLAHELGHSLGLSHSNDPGALMYPTY
SYTDPNEFLLPQDDIDGIQAIYGRSNVAVQPTGPITPEACDPNLTFDSITTLRGEIFFFK
GRYMLRKHPARTETELNFISLFWPRLPSGIQAAYENVETDEIVIFKEDKYWVIRGYDVLP
GYPKPIYRFGFPKTVKRVNAAYNDETTGKTYFFVADRYWRYDEKKKSMDHGYPKKIVSYF
GNIGRVDAAFQKDGYVYFFHGTTQFQFDPRAKRIVRQMKSTSWFNC
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccttcgtaattctcctgtcgctatatgtggctgtctcctctgcatttcctgtg
gctccagaagcagaagatgaaggaaaaaccctacagcttgtagagagctatctacagaat
ttctacgaccttcaaagggatcaccatccccatgtaagaagcagtggtgaaaaccccctt
actgcaaagctcaaggaaatgcagtctttctttggactagaggtgacaggaaaacctgat
cttgacacactggaggtgatgaaaaaacccaggtgtggtgtacctgatgtagagaaatat
gtgttcacaccaggaaatcccaaatggaaaagaaataatctgacatacaggattttgaat
tacaccccaaagatgagacgagctgatgtagatgaagcaatcagaaaagctctcagtgtc
tggagcaatgtgacaccattgacattccaaaaggttgaggacaaggaggcagatataatg
atctcttttgcttatagagaccaccgtgacaattccccttttgatggtcccaatgggcag
ctggctcatgcattccagcctggtgaaggtattggtggagatgtgcatatggatgaggag
gaagcttggacaaaagatggaagaggctacaatttgttcattgttcttgcccatgagctt
ggccattcactgggtctgtctcattcaaatgatcctggagcactgatgtatccaacttac
tcctacaccgatcccaatgaattccttcttcctcaggatgacattgatggaattcaggcc
atttatggacggtctaatgttgctgtgcagccaacaggacccataactccagaagcttgt
gacccaaatttgacatttgattctattactaccctacgtggagaaatattcttcttcaag
ggcagatacatgctgcgcaagcatcctgcaaggacagagacagagctcaattttatctca
ctgttctggccaaggttaccatcaggaattcaagctgcttatgaaaatgttgagacagat
gaaattgtaatttttaaagaggataaatattgggtcatcaggggatatgatgttctacct
ggctatcccaaaccaatctatcgctttgggttcccaaagactgttaaaagagttaatgca
gcttacaatgatgaaaccacaggaaaaacttacttctttgtggctgacagatactggaga
tatgatgaaaagaaaaaatccatggaccatgggtatcccaagaaaatagtctcctacttt
ggaaacattggcagagttgatgctgctttccagaaagatggctatgtgtatttcttccat
ggaacaactcagttccagtttgatcctcgtgccaaacggattgttcgacaaatgaagagc
accagctggtttaattgttaa
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