Plasmodium malariae: PMUG01_12024800
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Entry
PMUG01_12024800 CDS
T09444
Symbol
RRP42
Name
(RefSeq) exosome complex component RRP42, putative
KO
K12589
exosome complex component RRP42
Organism
pmal
Plasmodium malariae
Pathway
pmal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PMUG01_12024800 (RRP42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmal03019
]
PMUG01_12024800 (RRP42)
Messenger RNA biogenesis [BR:
pmal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PMUG01_12024800 (RRP42)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
PMUG01_12024800 (RRP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
39870240
NCBI-ProteinID:
XP_028862939
UniProt:
A0A1A8W858
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All DBs
Position
12:726658..727506
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AA seq
282 aa
AA seq
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MSSSKYIEDGINSNIRVDGRTLLTYRTIEINKNILVSADGSSSVMNEENNVICGVKLSLL
SPSADANDEGFVNLKIDCPASVGANRIKKEHLQIMTSIIYDLCIKNNINKKKLCILPSKF
VWGVDINVMVLNAGGGLLDIISIAIYVALNDMTMPIVKPKKKIDELNMFHNTKCKDYQVE
IVENQKTNFPYENIPICISIGEINNKYIYDMSKIEEELVENIFVVAITSSGKCVAFHKLY
GISMEISSILNMTENSIKVSHFLFEKINEAICKIRTRSALIK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctcaaaatacattgaagatggcattaattcaaacataagagttgacgggaga
acattattaacatatagaactatcgaaataaacaagaatatattggtatcagcagatggg
agtagtagtgttatgaatgaagaaaacaatgtaatatgtggagtaaaactttctctgcta
tcacctagtgcagatgcaaatgatgaaggttttgtcaatttaaagatagactgccctgca
tctgtaggtgcaaatagaataaagaaagaacacttacaaattatgacatcaattatttat
gacttatgtataaaaaacaatattaataaaaaaaaattatgtattttgccttcaaaattt
gtttggggagttgacataaatgtaatggttttgaatgctggaggaggactattagacatt
attagcatagcaatatatgtagctttaaatgatatgaccatgcctattgtgaaaccaaaa
aaaaaaattgatgaattaaatatgtttcataacacaaaatgtaaggactatcaagtagaa
attgtagaaaaccagaaaaccaattttccgtatgaaaatatcccgatatgtatttcaatt
ggggaaataaacaataaatatatatacgatatgtcaaagattgaagaggaattagttgaa
aatatttttgtagtggctattacatcaagcggaaaatgtgtagcatttcataagctctat
ggaatatcaatggaaatatcttcaatattaaatatgactgaaaattcaataaaagtttca
catttcctctttgagaaaattaatgaagcaatatgtaaaatacgaacaagaagtgcccta
ataaaataa
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