KEGG   Pseudomonas maumuensis: KSS90_22830
Entry
KSS90_22830       CDS       T07719                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
pmam  Pseudomonas maumuensis
Pathway
pmam02024  Quorum sensing
pmam03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmam00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KSS90_22830 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    KSS90_22830 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmam03019]
    KSS90_22830 (hfq)
   03036 Chromosome and associated proteins [BR:pmam03036]
    KSS90_22830 (hfq)
Messenger RNA biogenesis [BR:pmam03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     KSS90_22830 (hfq)
Chromosome and associated proteins [BR:pmam03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    KSS90_22830 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: QXH56125
UniProt: A0ABX8NJF6
LinkDB
Position
complement(5104985..5105245)
AA seq 86 aa
MSKGHSLQDPYLNTLRKEKVPVSIYLVNGIKLQGQIESFDQFVVLLKNTVSQMVYKHAIS
TVVPARPVRLPSPTDGEHGDSEPGNA
NT seq 261 nt   +upstreamnt  +downstreamnt
atgtcaaaagggcattcgctacaagacccttacttgaacaccttgagaaaagaaaaagtc
ccggtttcgatctatctggtcaacgggatcaagctgcagggccagatcgaatccttcgac
cagttcgtcgtgctgctgaaaaacaccgtcagccagatggtctacaagcacgccatttcg
accgtcgtccccgcacgcccggttcgtctgccaagcccgaccgatggtgagcacggcgac
agcgagccaggcaacgcttga

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