Pseudomonas mandelii: OU5_3667
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Entry
OU5_3667 CDS
T03626
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pman
Pseudomonas mandelii
Pathway
pman00300
Lysine biosynthesis
pman00470
D-Amino acid metabolism
pman01100
Metabolic pathways
pman01110
Biosynthesis of secondary metabolites
pman01120
Microbial metabolism in diverse environments
pman01230
Biosynthesis of amino acids
Module
pman_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pman00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OU5_3667 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OU5_3667 (dapF)
Enzymes [BR:
pman01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
OU5_3667 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AHZ70746
UniProt:
A0A024EDU7
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Position
complement(4143209..4144039)
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLIVEAPSNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGIIELDIRSDGQIGVNM
GAPRLVPTEIPFDAPEQALSYKLDVEGTTVELAAVSMGNPHAVLRVSDINNAPVHELGPK
IEHHPRFPARVNVGFLQVIDRNRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGHPVMMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcacggcctgggcaacgacttcatggtcctcgacctg
gtcagccagcacgcgcacatcctgcccaagcacgccaagcaatggggcgatcggcacacc
ggcatcggtttcgaccagttgctgatcgtcgaagcgccgagcaacccggacgtggacttc
cgctaccggatcttcaactccgatggttccgaagtggaacagtgcggcaacggtgcgcgc
tgtttcgcccgcttcgtgctcgacaaacgcctgaccgccaagcggcagattcgcgtcgag
accaaaagcggcatcatcgaactggatatccgcagcgacggccagattggtgtcaacatg
ggcgcaccgcgcctggtgccgaccgagattccattcgacgcgccagaacaggccttgagt
tataagctcgatgtcgagggtacgaccgtcgaactggccgccgtgtccatgggaaacccc
catgccgtgttgcgggtcagcgacatcaacaacgcaccggtgcatgaactgggaccgaaa
atcgaacaccacccgcgcttcccggcgcgggtcaacgtcggttttctccaggtcatcgac
cggaaccgtgcgcagttgcgcgtctgggaacgtggcgccggggaaacccaggcctgcggc
accggcgcctgcgctgccgcagtggccgcgatcagccaggggtggatggattcgccgcta
ttgatcgacctgcccggcgggcgtctgtccattgaatgggcaggccctggccatccggtc
atgatgaccggcccggcagtccgcgtttatgaaggacaagtgcgtctttga
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