KEGG   Pseudomonas marincola: PMYSY11_3903
Entry
PMYSY11_3903      CDS       T07318                                 
Symbol
soxA
Name
(GenBank) Sarcosine oxidase subunit alpha
  KO
K00302  sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
Organism
pmao  Pseudomonas marincola
Pathway
pmao00260  Glycine, serine and threonine metabolism
pmao01100  Metabolic pathways
Module
pmao_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:pmao00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PMYSY11_3903 (soxA)
Enzymes [BR:pmao01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.3  With oxygen as acceptor
    1.5.3.1  sarcosine oxidase (formaldehyde-forming)
     PMYSY11_3903 (soxA)
    1.5.3.24  sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
     PMYSY11_3903 (soxA)
SSDB
Motif
Pfam: GCV_T SO_alpha_A3 Fer2_4 GCV_T_C Pyr_redox_2 FAD_oxidored FAD_binding_2 GIDA HI0933_like NAD_binding_8 DAO Pyr_redox_3 FAD_binding_3 Thi4 AlaDh_PNT_C Lycopene_cycl SoxG XdhC_C
Other DBs
NCBI-ProteinID: CAE6945281
LinkDB
Position
PMYSY11:complement(4116941..4119958)
AA seq 1005 aa
MSQVNRLTNGGRIDRSQPLNFSFNGQSYQGFAGDSLAAALLANGVDIVGRSFKYSRPRGI
VAAGSEEPNAILQIGSTEEAQIPNVRATQQALYSGLVATSTNGWPSVNTDMMGILGKVGG
KMMPPGFYYKTFMYPQNLWLTYEKYIRKAAGLGRAPTEVDPDSYDYLNQHCDVLVVGAGP
AGLAAALAAGRSGARVILADEQEEFGGSLLDTRELLDGKPAAEWAAEALAELQGMPEVTL
LLRATVNGYHDHNFLTIHQRMTDHIGEVAPMGMVRQRMHRVRAKRVVLATGAHERPLVYA
NNDVPGNMLAGAVSTYVRRYAVLPGRKLVLSTNNDYAYRVVLDWLDAGQQVVAVADARTN
PRGTWVEQARARGVRILTGSAVVEARGSKRVDAARICAIDVAKHKVTSPGEVLDCDLIVS
SGGYSPVVHLASHLGGRPTWQADLLAFVPGEGLQKRVCAGAVKGVFALGDTLADGFEAGV
MAAAEVGFDAAVGTLPSVEQLNEEATVALFQVPHDKSTARAPKQFVDFQNDVTAAGIELA
TREGFESVEHVKRYTALGFGTDQGKLGNINGLAIAARSLGISIEQMGTTMFRPNYTPVTF
GAVAGRHCGALFEPKRYTAMHAWHVANGAEFEDVGQWKRPWYFPKNGEDLHAAVARECLA
VRNAVGILDASTLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGV
TACLADNHFLMTTTTGGAARVLDWLELYHQTEWPDLKVYFTSVTDHWATMTLSGPNSRKL
LAEVTDIDLDKDAFPFMAWKEGEVGGVPARVFRISFTGELSYEVNVQADYAMGVWQKIIE
AGKKHGLTPYGTETMHVLRAEKGFIIVGQDTDGSVTPDDLNMSWCVGRNKPFSWIGLRGM
NRQDCVREQRKQLVGLKPVNPQQLLPEGAQLVFDPKQAIPMTMVGHVTSSYMSAALGYSF
AMAMVKGGLQRIGERVFAPLVDGSVIEAEIVSSVFYDPKGERQNV
NT seq 3018 nt   +upstreamnt  +downstreamnt
atgagccaagttaatcgtctaaccaatggcggccggattgaccgcagccagcccttgaat
ttcagcttcaatggccagtcgtatcaaggcttcgccggtgactcactggccgctgcgtta
ctggccaatggcgtggatattgtcgggcgtagtttcaagtactcccgtccgcgcgggatt
gtcgcggcggggagcgaagagccaaacgccatcctgcaaatcggttcgaccgaagaagcg
caaatccctaacgtgcgggcgactcagcaagcgctttactccggtttggtggcgaccagc
accaacggctggccgagtgttaataccgacatgatggggattctcggtaaggtcggcggc
aagatgatgccccccggtttttactacaaaaccttcatgtatccgcagaacctgtggctg
acgtacgaaaagtacatccgtaaagccgcagggctgggccgtgcgccgacagaagttgac
cccgacagttacgactacctcaatcagcattgtgatgtgttggtggtaggcgcggggcct
gcgggtttggccgctgcactggcggcaggtcgcagtggcgcgcgggtgattctggcggac
gagcaggaagagtttggcggcagcttgctcgacacgcgtgaactgctggacggcaagcct
gcagccgagtgggcagccgaggcgctggctgagctgcaaggcatgccagaagtcaccttg
ttgctgcgcgcgacagtgaatggctatcacgaccataacttcttgacgattcatcagcgc
atgaccgatcacatcggtgaagtcgcgccgatgggcatggtgcgtcagcgcatgcaccgg
gtacgtgccaagcgtgtggtgctggcgaccggtgcgcatgagcgcccgctggtttacgcc
aacaacgatgtgcctggcaatatgctcgcgggcgctgtgtcgacctatgtgcgccgttac
gcggtgctgcccggtcgcaagctggtgctttcaaccaacaacgattacgcctaccgcgtg
gtgctggactggctcgacgctggccagcaagtggttgccgtggcagatgcgcggactaac
ccgcgtggcacctgggttgagcaggcgcgcgcacgcggtgtgcggattttaactggcagc
gccgtggttgaagcgcgcggcagcaagcgtgttgatgcggcgcggatctgtgcgatcgat
gtggccaagcataaagtcaccagcccgggtgaagttcttgattgcgatttgatcgttagc
tccgggggctacagcccagtggttcatctggcatcgcatctgggtgggcgaccaacatgg
caggccgacttgctggcatttgtgccgggcgaaggcttgcaaaagcgtgtgtgcgccggg
gcggtgaaaggcgtttttgcattgggcgacacgctggcagatggttttgaagcgggtgtg
atggccgctgccgaagtcggctttgacgccgctgttggcacgctgccaagcgttgagcaa
ctcaacgaggaagcgacggttgcgctgttccaagtaccgcacgataaatcgaccgcgcgc
gcccctaagcagtttgtcgacttccagaatgacgtcactgcagccggtatcgagctggca
acccgtgaaggctttgagtcggttgagcacgttaagcgctacaccgcgctcggctttgga
accgatcagggcaagctcggcaatatcaatggcctggcgattgctgcacgctcactgggc
atcagcatcgagcaaatgggcaccaccatgttccggcctaactacacgccggtgacattc
ggcgcggttgctggccgccattgcggtgcgttgtttgagccaaagcgttacaccgcgatg
catgcgtggcacgttgccaacggcgctgagtttgaagatgtcggccagtggaagcggccg
tggtacttcccgaaaaatggtgaagacctgcacgcggctgtcgcacgtgagtgcctggct
gtgcgcaatgctgtgggcattcttgacgcctcgacgctgggcaagattgatattcagggc
cctgatgcccgtgagtttctcaatcgtgtgtacaccaacgcgtggaccaaactggatgtc
ggcaaagcccgttacggtttgatgtgcaaagaagacggcatggtcttcgacgacggtgta
acggcgtgtctggcggacaaccactttctgatgaccaccaccaccggtggcgcggcgcgg
gttctcgactggctggagctttatcaccagaccgaatggccggatctgaaagtgtatttc
acctcggtgaccgatcactgggcgacgatgacgctgtccggcccgaacagccgcaagctg
ctggcggaagtcacggatatcgacctcgataaagacgcgttcccgtttatggcgtggaaa
gaaggcgaagtcggtggtgtaccggcgcgggttttccggatctccttcactggcgagttg
agctacgaggtcaacgtgcaggcggattacgccatgggcgtttggcagaagattatcgaa
gcaggcaagaagcacggtcttacgccttacggcactgaaaccatgcacgttttgcgggcc
gagaaaggcttcatcattgtcggccaggataccgatggttcggtcacgccggacgacctc
aacatgagctggtgtgtgggccgcaacaagccgttttcatggatcggtttgcgcggtatg
aatcgccaggattgcgtgcgcgagcagcgtaaacaattggtggggttgaagccggttaat
cctcagcagctattgccggaaggtgcgcaactggtctttgacccgaaacaggcgataccc
atgaccatggtcggccacgtcacttccagctacatgagtgctgcgttgggctactcgttt
gcaatggcgatggttaaaggcggtttgcaacgcatcggcgagcgggtgtttgcgcccctg
gtcgatggcagcgtgattgaagccgaaattgtcagctccgtattttatgacccgaaaggg
gaacgccagaatgtctaa

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