Paracoccus marcusii: CP157_00528
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Entry
CP157_00528 CDS
T07681
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pmau
Paracoccus marcusii
Pathway
pmau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CP157_00528 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmau03021
]
CP157_00528 (rpoB)
03400 DNA repair and recombination proteins [BR:
pmau03400
]
CP157_00528 (rpoB)
Enzymes [BR:
pmau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CP157_00528 (rpoB)
Transcription machinery [BR:
pmau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CP157_00528 (rpoB)
DNA repair and recombination proteins [BR:
pmau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CP157_00528 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QXI62841
LinkDB
All DBs
Position
517232..521377
Genome browser
AA seq
1381 aa
AA seq
DB search
MAQAYVGQKRIRRYYGNIREVLEMPNLIEVQKSSYDLFLNSGEGSGHNDGDGIQGVFQSV
FPIKDFNETATLEFVKYELEKPKYDVDECQQRDMTYAAPLKVTLRLIVFDVDENTGAKSV
KDIKEQDVFMGDMPLMTTNGTFIVNGTERVVVSQMHRSPGVFFDHDRGKTHSSGKLLFAC
RIIPYRGSWLDFEFDAKDLVFARIDRRRKLPVTTLLYALGMDQEAIMDAFYETVTYSLRR
EGREQGWVTRFFPERVRGTRPAYDLVNADTGEVITKAGEKVTPRLVKKLLESEEQLNLFV
PFERIVGRFVAKDIVNDQTGFIYAEAGDEITAEYDKQGEMTGGLLKVLLDNDITDVPVLD
IDHVNVGPYIRNTMAADKNMGREGALMDIYRVMRPGEPPTVEAASNLFNSLFFDSERYDL
SAVGRVKMNMRLDLDAPDTQRTLRHEDIVSCISGLVELRDGKGEIDDIDHLGNRRVRSVG
ELMENQYRVGLLRMERAIRERMSGVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQ
TNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRMCPIETPEGQNIGLINSLAT
FARVNKYGFIETPYRKVVDGHVTDDVVYMSATEEMRHTVAQANATLDENGNFTDELISTR
QSGDFMLNPVDAVDLIDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLLRAEA
PFVGTGMEATVARDSGAAIMARRGGIIDQVDAQRIVVRATEDMGAGDAGVDIYRLRKFKR
SNQSSTINQRPLVKVGEKVVANQVIADGPSTDQGELAIGRNVVVAFMPWNGYNYEDSILI
SERIHRDDVFTSIHIDEYEVAARDTKLGPEEITRDIPNVGEEALRNLDEAGIVYIGAECG
PGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGAYGTIVEVRVFNRHG
VDKDERALQIEREEVERLARDRDDEQGILDRNIYARLKTLILGKTALKGPKGIKSGTEIT
EELLGTMSRGQWWQLAVSEEDIAKDVEALNGQYDTQKKLLEARFEDKVEKVRQGDDLPPG
VMKMVKVFVAVKRKLQAGDKMAGRHGNKGVVSKVVPMEDMPFLADGTPVDLVLNPLGVPS
RMNVGQILETHMGWASRALGLKIDEALEEYRRNGDMTPVREAMRIGYGDELYSEMFDGLD
DETLREHAGTVRTGVPIATPVFDGAKEADVNDALTRAGFDTSGQSVVFDGRSGEQFARKV
TVGMKYVLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGAAY
TLQEMLTVKSDDVAGRTKVYESIVKGEDNFEAGVPESFNVLVKEVRGLGLNMELLDADEE
E
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagcttatgtcggccaaaagcggatccgccgctattatggcaacatccgtgaa
gttctggagatgccgaacctgatcgaggttcagaaatcctcctatgacctgttcctgaac
tcgggcgagggcagcggtcataacgatggtgacggcatccagggcgtgttccagtcggtg
ttcccgatcaaggacttcaacgagacggccacgctggagttcgtcaagtacgagctggag
aagccgaaatacgacgtggacgagtgccagcagcgcgacatgacctatgccgcgccgctg
aaggtcaccctgcgtctgatcgtgttcgatgtcgacgagaacaccggggcgaaatccgtc
aaggacatcaaggaacaggacgtcttcatgggcgacatgcccctgatgacgacgaacggc
acgttcatcgtgaacggcaccgagcgcgtggtcgtcagccagatgcaccgcagcccgggc
gtgttcttcgaccatgaccgcggcaagacccattcctcgggcaagctgctgtttgcctgc
cgcatcattccctatcgcggctcgtggctggacttcgaattcgacgccaaggatttggtg
ttcgcccggatcgaccgccgccgcaagctgccggtgacgacgctgctttatgccctgggc
atggatcaggaagcgatcatggacgcgttctatgagaccgtgacctactccctgcgccgc
gaggggcgcgagcagggctgggtgacgcggttcttccccgagcgcgtgcgcggcacccgg
cctgcctatgacctggtgaacgccgataccggcgaagtcatcacgaaggccggcgagaag
gtcaccccgcgcctggtgaagaagctgctggaatccgaagagcagctgaacctgttcgtc
ccgttcgagcgcatcgtcggccgcttcgtcgccaaggacatcgtcaacgaccagaccggc
ttcatctatgccgaggccggcgacgagatcaccgcggaatacgacaagcagggcgagatg
accggcggcctgctgaaggtgctgctggacaacgacatcaccgacgtgccggttctggac
atcgaccacgtcaacgtgggtccctacatccgcaacacgatggcggccgacaagaacatg
ggccgcgaaggcgcgctgatggacatctatcgcgtcatgcgcccgggcgagccgcccacc
gtcgaggccgcgtcgaacctgttcaactcgctgttcttcgacagcgagcgttacgacctg
tccgccgtgggccgggtcaagatgaacatgcgccttgatctggacgcccccgacacgcag
cgcacgctgcgccacgaggacatcgtgtcctgcatcagcggcctggtcgaactgcgcgac
ggcaagggcgagatcgacgacatcgaccacctgggcaaccgccgggtgcgttcggtcggc
gagctgatggagaaccagtaccgcgtcggcctgctgcgcatggagcgtgccatccgtgag
cgcatgtccggcgtcgagatcgacaccgtcatgccgcaggacctgatcaacgcaaaaccc
gcagcggcggcggtgcgtgaattcttcggctccagccagctgtcgcagttcatggaccag
accaacccgctgtccgaggtgacgcacaagcgtcgcctctcggccctggggccgggcggt
ctgacgcgcgaacgcgcaggcttcgaggttcgcgacgtccacccgacccattacggacgg
atgtgcccgatcgagacgccggaaggtcagaacatcggcctgatcaacagccttgccacc
tttgcacgggtgaacaagtacggcttcatcgagacgccctaccgcaaggtggtcgacggt
cacgtgaccgacgacgtcgtctatatgtccgcgaccgaggagatgcgtcacaccgtggcg
caggccaacgcgaccctggacgagaacggcaacttcaccgacgagctgatctcgacccgc
cagtcgggcgacttcatgctgaacccggtcgatgcggtcgacctgatcgacgtgtcgccc
aagcagctggtttcggtcgcggcggcgctgatcccgttccttgagaacgacgacgccaac
cgcgcgctgatgggctcgaacatgcagcgtcaggccgtgcctctgctgcgtgccgaggcg
ccgttcgtgggcaccggcatggaagccaccgtggcgcgcgattcgggcgccgcgatcatg
gcgcgccgtggcggcatcatcgaccaggtcgatgcgcagcggatcgtggtccgggcgacc
gaggacatgggcgcgggcgacgcgggcgtggacatctatcgtctgcgcaagttcaagcgt
tcgaaccagtcctcgaccatcaaccagcgcccgctggtgaaggtcggagagaaggtcgtg
gccaaccaggtcatcgcggacggtccctcgaccgatcagggcgaactggcgatcggccgg
aacgtggtcgtggccttcatgccgtggaacggctacaactacgaggactcgatcctgatc
tccgagcggatccaccgcgacgacgtattcacctcgatccatatcgatgaatacgaggtt
gcggcccgcgacaccaagctggggccagaggagatcacccgcgacatcccgaacgtgggc
gaagaagccctgcgcaacctggatgaagccggcatcgtctacatcggcgccgaatgcgga
ccgggcgacatcctggtgggcaagatcacccccaagggcgaaagcccgatgacgccggaa
gaaaagctgctgcgcgccatcttcggtgagaaggcgtccgacgtccgcgacacctcgctg
cgtctgccgccgggtgcctatggcacgatcgtcgaggtccgggtgttcaaccgccacggc
gtcgacaaggacgagcgcgccctccagatcgagcgtgaggaagtcgagcgtctggcgcgc
gaccgcgacgacgaacagggcatcctggaccgcaacatctatgcgcgtctgaagaccctg
atcctgggcaagaccgccctgaaggggccgaaaggcatcaagtcggggaccgagatcacc
gaggagctgctgggcaccatgtcccgcggccagtggtggcagctggccgtcagcgaagag
gacatcgccaaggatgtcgaggcgctgaacggtcagtacgacacccagaagaagctgctg
gaagcccgcttcgaggacaaggtcgagaaggtccgtcagggcgacgacctgccgccgggc
gtgatgaagatggtcaaggtgttcgtcgccgtgaagcgcaagcttcaggcgggagacaag
atggccggtcgtcacggcaacaagggcgtcgtgtccaaggtcgtcccgatggaggacatg
ccgttccttgcggatggcacccccgttgacctggttctgaaccccctgggcgtgccgtcg
cgcatgaacgtgggtcagatcctggagacccacatgggttgggctagccgcgccctgggc
ctcaagatcgacgaggcgctggaggagtatcgccgcaacggcgacatgactccggtccgc
gaggcgatgcgcatcggttacggcgacgagctgtattccgagatgttcgacggcctggac
gacgagaccctgcgcgagcatgcgggcaccgtccgcacgggcgtgccgatcgcgacgccg
gtcttcgacggcgccaaggaggccgacgtcaacgacgcgctgacccgtgccgggttcgac
acgtcgggccagtcggtggtgttcgatggccgttcgggcgaacagttcgcccgcaaggtc
accgtggggatgaagtacgtcctgaagctgcaccacctggtcgacgacaagatgcacgcg
cgttccacgggtccgtactcgctggtcacgcagcagcccctgggcggcaaggcccagttc
ggcggccagcgtcttggcgagatggaggtctgggccctggaagcctatggcgcggcctac
acgctgcaggaaatgctgacggtcaagtcggacgacgtcgccggccgcacgaaggtctac
gagtccatcgtcaagggcgaggacaacttcgaagcgggcgtgccggaatcgttcaacgtg
ctggtcaaggaggtccggggtctgggcctcaacatggaactcctggatgcggacgaggag
gagtga
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