Peromyscus maniculatus bairdii (prairie deer mouse): 102904067
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Entry
102904067 CDS
T11302
Symbol
Lhx5
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
102904067 (Lhx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmav03000
]
102904067 (Lhx5)
Transcription factors [BR:
pmav03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
102904067 (Lhx5)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Prok-RING_1
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
102904067
NCBI-ProteinID:
XP_006970855
Ensembl:
ENSPEMG00000016892
UniProt:
A0A6I9L053
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All DBs
Position
23:12025573..12034741
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AA seq
402 aa
AA seq
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MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQSDYYAPGGNYDFFAHGP
PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHGADNPRFTDMISHPDTPSPEPGLPGA
LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcactgtgccggctgtgagcggcccatcctcgaccgctttctgctgaacgtg
ctggaccgcgcgtggcatatcaaatgtgttcaatgctgcgagtgcaaaaccaacctctca
gagaagtgcttctcccgggagggcaagctgtactgtaaaaacgacttcttcagacgcttc
ggcaccaagtgtgcgggctgtgcgcaaggcatctctcccagcgacctggtgcgcaaggcc
cggagcaaagtcttccacctcaactgcttcacctgcatggtgtgcaacaaacagctgtcc
acgggagaggaactctacgtgatcgacgaaaacaagtttgtgtgcaaagacgactacctg
agctcctctagcctcaaggaaggaagcctcaactcagtgtcatcctgtacggaccgcagt
ttgtccccggacctccaggacccgttacaggacgaccccaaagagaccgacaactcgacc
tcatcggacaaggagaccgcgaacaacgagaacgaggaacagaactccggcacgaagcgg
cgcggcccgcgcaccaccatcaaagccaagcagctggagacgctcaaggcggccttcgcg
gccacgcccaagcccacgcgccacatccgcgaacagctggcccaggaaaccggcctcaac
atgagggtcattcaggtgtggtttcagaaccgaaggtccaaagaacgccgcatgaaacag
ctgagcgctctgggagcccggagacacgccttcttccggagtccgcggcgcatgcgtccc
ctgggcggccgcttggacgagtctgagatgttggggtctaccccgtacacttactacgga
gactaccaaagcgactactacgccccgggaggaaactacgacttcttcgcgcacggcccg
ccctcgcaggctcagtccccagccgactcaagcttcctggcagcgtcgggacccggctcg
acgccgctgggcgcgctggaaccgccactggccgggccgcacggcgcggacaaccccagg
ttcaccgacatgatctcgcacccggacacgcccagccccgagcccggcctgcccggcgcg
ctgcaccccatgcccggagaggtgttcagcggcgggcccagcccgcccttccccatgagc
ggcaccagcggctacagcggacccctgtcgcatcccaaccccgagctcaacgaggcggcc
gtctggtaa
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