Peromyscus maniculatus bairdii (prairie deer mouse): 102904878
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Entry
102904878 CDS
T11302
Symbol
Sec24c
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102904878 (Sec24c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmav04131
]
102904878 (Sec24c)
Membrane trafficking [BR:
pmav04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
102904878 (Sec24c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
102904878
NCBI-ProteinID:
XP_006984849
Ensembl:
ENSPEMG00000023656
LinkDB
All DBs
Position
9:complement(39948606..39972645)
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AA seq
1122 aa
AA seq
DB search
MNVNQSAPPVPPFGQNQPIYPGYHQSSYGGQPGPAVPAAPYGAYNGPVPGYQQTPLQGVP
RAPPSSGAPPASTAQAPCGQTPYGQFGQGDIQNGPSSAAQMQRLPAAASASQQFGSPLAP
VVSQPAVLQPYGPPPTSAQVTAQLAGMQISGAASQAPPSSGLGYGPPTSLASASGSFPNS
GPYGSYPQSQAPSLSQAQGHPGVQPPLRSAPPLASSFTSPASGGPRMPSMTGPLPPGQGF
GSLPVNQPNHVSSPPAHALPPGTQMTGPPVPPPPMHSPQQPGYQLQQNGSFGPARGPQPN
YESPYPGASTFGSQPGPPQPLPPKRLDPDAIPSPQLNELPPQQKTRHRIDPDAIPSPIQV
IEDDRNNRGSEPFVTGVRGQVPPLVTTNFLVKDQGNASPRYIRCTSYNIPCTSDMAKQAQ
VPLAAVIKPLARLPPEEASPYVVDHGESGPLRCNRCKAYMCPLMTFIEGGRRFQCSFCSC
INDVPPQYFQHLDHTGKRVDAYDRPELSLGSYEFLATVDYCKNNKFPSPPAFIFMIDVSY
NAIRTGLVRLLCEELKSLLDYLPREGGAEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMV
VSDVADMFVPLLDGFLVNVNESRAVITSLLDQIPEMFADTRETETVFAPVIQAGMEALKA
AECAGKLFVFHTSLPIAEAPGKLKNRDDRKLINTDKEKTLFQPQTGTYQTLAKDCVAQGC
CVDLFLFPNQYVDVATLSVVPQLTGGSVYKYACFQVENDQERFLSDLRRDVQKVVGFDAV
MRVRTSTGIRAVDFFGAFYMSNTTDVELAGLDEDKTVTVEFKHDDRLNEESGALLQCALL
YTSCAGQRRLRIHNLALNCCAQLADLYRNCETDTLINYMAKFAYRGVLNSPVKTVRDTLI
TQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGAEVTTDDRAYVR
QLVSCMDVAETNVFFYPRLLPLTKSPMDSTTEPPAVRASEERLSSGDIYLLENGLNLFVW
VGASVQQGVVQSLFNVSSFSQITSGLSVLPVLDNPLSKKVRGLIDSLRAQRMRYMKLIVV
KQEDKLEMLFKHFLVEDKSLSGGASYVDFLCHMHKEIRQLLS
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcaaccaatcagctccacctgttccaccatttgggcagaaccagcccatctac
ccagggtatcatcagtccagttatggtgggcaaccaggacctgcagtacctgctgctcct
tatggggcctacaatggcccagtgccaggctatcagcagacacctctccaaggtgtgccg
agagccccaccttcctcaggggcacccccagcttcaacagcacaggccccctgtggtcag
acgccatatggccaatttggtcaaggtgatatacagaatgggccaagctccgcagctcag
atgcaaaggctcccggcagcggcgtcggcgtctcagcagtttgggtccccattggcccct
gtggtcagccagccagctgtgcttcagccctatggccctcccccgacaagtgcacaggtg
accgcacagctcgccggaatgcagatcagtggtgctgcgtcccaagcccctccctcttct
gggttgggctatggtccaccaacatcattggcctcagcctcaggaagtttccctaattct
ggtccctatggctcctatcctcagagccaggctccttcccttagccaggctcaaggtcat
cctggagtccagcctcctctgcgatctgccccaccactggcttccagcttcacatcccca
gcttcaggtggtcctcggatgccttccatgactggcccactcccgcctggacagggcttt
gggagtctcccagtgaaccagcccaaccacgtgtcctcgcctcctgctcatgctctgccc
ccaggcacccagatgactgggcccccagtaccaccaccgcctatgcactcccctcagcag
ccgggctatcagctgcagcaaaatggttcctttggaccagcccgaggccctcagcctaat
tatgagagcccataccctggagcgtctacctttggcagtcagcctgggcctcctcagcca
ctgcctcctaagcgcctggaccctgatgccatccccagccctcaacttaatgagctgcct
cctcagcagaaaaccaggcacagaatagaccctgatgccattcctagtccaattcaggtc
attgaagatgataggaacaaccggggttcagagccatttgtgactggtgtacggggacag
gtgccacccttagtcaccaccaacttcctggtgaaagaccaagggaatgcaagtccccgg
tacattcgatgcacgtcttataatatcccttgcacatctgacatggctaagcaggctcag
gtgcctctggcggctgtcatcaagccactggctaggctgcccccagaggaggcttcaccg
tatgttgtggaccatggtgaatctggtcctctgcgctgtaatcgctgcaaagcatacatg
tgccctctcatgacattcatcgagggagggaggcgcttccagtgctccttttgcagctgt
atcaatgatgttcccccccagtattttcaacatctggatcataccggcaaacgtgtggat
gcttatgaccgtcctgagctgtccctgggctcctatgaattcttggccactgtagattac
tgcaagaacaataagttccccagtccgcctgccttcatctttatgattgatgtctcctac
aacgccatcaggactggtcttgttcggctcctctgtgaggagctcaagtcactcttagac
tacctgccgagggagggtggagccgaagagtcagcaatccgagttggctttgtcacctac
aataaagtgctccacttctacaatgtgaagagctccttggctcagccacagatgatggtt
gtatctgatgtggctgacatgtttgtgccactgctggatggcttcctggtcaacgtcaat
gagtcccgggcagttatcaccagcttactggatcagatcccagaaatgtttgcggataca
agagagacagagacagtatttgccccggttatccaggctgggatggaagctctgaaggct
gccgagtgtgcgggaaagctgtttgtgttccacacgtccttgcccattgcagaggcccca
gggaagctgaagaatagagatgacaggaagttgatcaacacagacaaggagaagactttg
ttccagcctcagacaggtacctatcagactctggccaaagactgtgtggcccaaggctgc
tgtgtggacctcttcctcttccctaaccaatatgtggatgtggctacactctctgttgtt
ccccagctcactggaggctctgtctacaaatatgcctgctttcaggtggagaatgaccag
gaacggttcttgagtgacctgcggcgggatgtacagaaggtggttggctttgatgctgtg
atgcgggttcggacaagcactggtatccgtgctgtagatttctttggagctttctacatg
agcaacacaaccgatgtggagttggctggactggatgaggacaagacagtgactgtggag
ttcaagcatgatgaccggctcaatgaagagagtggagccctcctgcagtgtgccctgctt
tataccagctgtgcagggcagcgtcggctccgcatccacaacctggccctaaactgctgc
gcccagttggctgatctctatcggaactgtgagactgacacgctcatcaactacatggcc
aagtttgcatatcggggtgttctgaatagccctgtgaagactgtccgagacacgctcatc
acccagtgtgctcagatcctggcctgttacagaaagaactgtgccagcccttcctctgca
ggacagctgatccttcccgagtgtatgaagctcctcccggtttacctgaactgtgtattg
aagagtgatgtcctgcagccgggagctgaggtcactaccgatgaccgcgcctacgtccga
cagctggtgtcctgcatggatgtagctgagaccaatgtcttcttctaccctcggctccta
ccactgacaaagtctcccatggacagtaccactgaaccaccagcagttcgagcgtctgaa
gagcgtttaagcagtggcgatatatatttgctggaaaacgggctcaacctctttgtctgg
gtgggggcaagtgtccaacaaggtgttgtccagagccttttcaacgtctcctccttcagt
cagatcaccagtggcttgagtgttctgccagttcttgataatccactgtccaagaaggtt
cgaggcctcattgatagcttacgggcacagagaatgcggtacatgaagcttatcgtggtg
aaacaggaagacaagttggagatgctgttcaagcacttcctggtggaagacaagagccta
agtggaggtgcatcctatgtggactttctgtgtcatatgcacaaggagattcggcagcta
ctgagctaa
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