Peromyscus maniculatus bairdii (prairie deer mouse): 102909030
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Entry
102909030 CDS
T11302
Symbol
Smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmav03036
]
102909030 (Smc4)
Chromosome and associated proteins [BR:
pmav03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
102909030 (Smc4)
Condensin II
102909030 (Smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
ATG17_like
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
102909030
NCBI-ProteinID:
XP_076430338
Ensembl:
ENSPEMG00000009281
LinkDB
All DBs
Position
6:50234124..50270817
Genome browser
AA seq
1286 aa
AA seq
DB search
MRRKGTKPSSVCRQEEGPPPSPDGAHSNGDPEQPDGGADSAAAAETPGEELDNRSLEEIL
NSIPPPPPPAMASEAGAPRLMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNV
IDSMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVIPNSN
FCVSRTAYRDNTSVYHISGKKRTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKPKG
QTEHDEGMLEYLEDIIGCGRLNEPIKVLCRRVEILNENRGEKLNRVKMVEKEKDALEGEK
NIAIEFLTLENEIFKKKNHICQYYIYDLQKRIAEMKTQKEKIHEDTKEITERSNMLSNEM
KAKNSAVKDIEKKLNKVTKFIEENKEKFTQLDLEDVQIREKLKHATSKAKKLEKQLQKDK
EKVEELKGIPAKSKSIISETTTKSSSLEKEREKEEKKLKEVMDSLKQETQGLQKEKESQE
KELMGFNKSVNEARSKMEVAQSELDIYLSRHNTAVSQLSKAKEALITASETLKERKAAIG
DINTKLPQTQRELKEKEKELQKLTQEEINLKSLVHDLFQKVEEAKSSLATNRSRGKVLDA
IIQEKKSGRIPGIYGRLGDLGAIDEKYDIAISSCCHALDYIVVDSIDTAQECVNFLKRHN
IGVATFIGLDKMAVWAKKMTKIQTPENTPRLFDLVKVNNEEIRQAFYFALRDTLVADNLD
QATRVAYQKDRRWRVVTLQGQIIEQSGTMTGGGSKVMRGRMGSSVIVEISEEEVNKMESQ
LERHSKQAMQIQEQKVQHEEAVVKLRHSEREMRNTLEKFTASIQGLSEQEEYLTVQIKEL
ETNVLTTAPDKKKQKLLEENVSAFKKEYDAVAEKAGKVEAEVKRLHDTIIEINNRKLKAQ
QTKLDMINKQLDECASAITKAQVAIKTADRNLKKAQDSVFRTEKEIKDTEKETNDLKAEL
KNIEDKAEEVIKNTNAAEESLPEIQKEHRNLLQELKVIQENEHALQKDALSVKLKLEQID
GHIAEHNSKIKYWQKEISKIKLHPVEDNPVETVSVLSPEDLEAIKDPGSITNQIALLETQ
CHEMKPNLGAIAEYKKKEELYLQRVAELDKITSERDNFRQAYEDLRKQRLNEFMAGFYVI
TNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLA
LVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISDRL
IGIYKTYNITKSVAVNPKEIASKGLG
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgtaagggcaccaagccctcctcggtctgccgccaggaggaagggccgccgccc
tccccagacggcgcccacagcaatggggaccccgagcaaccggacggcggagcggacagc
gctgcagctgcagagactccaggtgaggaacttgataacaggagtttggaagagattttg
aatagcattcctccacccccgcctccagcaatggccagtgaagctggagctcctcggcta
atgatcactcatattgtaaaccaaaacttcaagtcctatgctggagagaaaattctgggt
cctttccataagcgcttttcctgtattattggtccaaatggcagtggaaaatccaatgtt
attgattctatgctttttgtgtttggctatcgagcacaaaaaataaggtctaaaaagctg
tcagtattgatacataattctgatgaacataaggatattcagagttgtactgtagaagtt
cattttcaaaagataattgataaggaaggggatgactatgaagtcattcctaacagtaac
ttctgtgtatctagaacagcctacagagataacacttctgtttatcatataagtgggaaa
aagagaacatttaaagatgttggaaatcttcttagaagccatggaattgacttggaccat
aatcgatttttaatcttgcagggcgaagtcgaacagattgctatgatgaaaccaaaaggc
cagactgaacatgatgagggtatgcttgagtatttagaagatataattggctgtggacgg
ctaaatgaacctattaaagtcttatgtcggagagttgaaatattaaatgaaaacagagga
gaaaagttaaacagagttaaaatggtggaaaaggaaaaggacgccctagaaggggagaaa
aacatagccattgagttccttaccctggaaaatgaaatatttaaaaaaaagaatcatatc
tgtcaatattacatttatgatctgcaaaaaagaattgctgaaatgaaaacccaaaaggaa
aaaattcatgaagatactaaggaaattactgagaggagcaatatgctttcaaatgaaatg
aaagctaagaattcagctgtaaaggatatagaaaagaaactcaataaagttacaaagttt
attgaagaaaataaagaaaaatttacacagctagatttagaagatgttcaaattagggaa
aaattaaaacatgctacaagtaaagccaaaaagctggagaaacaacttcaaaaagataaa
gaaaaggtcgaagagctgaaaggtatacctgccaagagtaagagtatcataagtgagaca
acaactaaaagcagttctcttgagaaagaacgggagaaagaagaaaaaaagttaaaagaa
gttatggacagccttaaacaagaaacacaagggcttcagaaagaaaaggagagtcaagaa
aaagaacttatgggttttaacaaatcagtaaatgaagcacgttcaaagatggaagtcgct
cagtcagaacttgatatctatctcagtcggcataatacagcagtgtctcagctaagtaag
gcaaaggaagctctaattacagcttctgagactctcaaagaaaggaaagctgcaattgga
gatataaacacaaagctccctcagactcaacgagaattaaaggagaaagaaaaagaactt
cagaaattaacacaagaagaaataaacttgaaaagtttggttcatgatcttttccaaaaa
gttgaagaagcaaagagttccttagcaacgaatcgaagtcgagggaaagtacttgatgcg
ataattcaagaaaaaaaatcgggcaggatcccaggaatatatggaagattgggagacttg
ggagctattgatgaaaaatatgacattgctatttcatcctgttgccatgcactagactac
attgttgttgattctattgatacagcccaagaatgtgtaaacttccttaaacgacataat
attggtgtcgccacttttataggtttggataagatggcagtatgggccaaaaaaatgacc
aaaattcaaactcctgaaaacactcctcggttatttgatttagtgaaagtaaacaatgag
gaaattcgccaagctttttactttgctttacgagataccttagtggctgacaacttggat
caagctacaagagtagcttatcaaaaagacagacggtggagagtagtgactctacagggc
cagatcatagagcagtcaggtacaatgactggcggtggaagcaaagtaatgagaggaaga
atgggttcgtcggttatcgtggaaatctctgaggaagaggtaaataagatggaatcccag
ttggaaagacattctaaacaagcaatgcaaatccaagaacagaaagtacaacatgaagaa
gcagttgttaagttaaggcatagtgaacgagaaatgagaaatacactagaaaagttcact
gcaagcatccagggtctgtcagagcaagaagagtatttgactgtacaaattaaagaactg
gaaactaatgtgcttactacagcccctgataaaaagaaacagaaattgctagaagaaaat
gtcagtgcttttaaaaaagaatatgacgctgtggctgagaaagctggtaaagtagaagct
gaggttaagcgattgcacgataccatcatagaaatcaacaaccgaaaactcaaggctcag
caaaccaaacttgatatgataaataagcagctggatgaatgtgcttctgctattactaag
gcccaggtagcaatcaagactgctgacagaaatcttaaaaaggcacaagattctgtcttc
cgcacagagaaagaaataaaagacactgagaaagaaacaaatgatttaaaagcagaatta
aaaaatattgaagacaaagcagaagaagtcatcaaaaatacaaatgctgcagaggagtcg
ttaccagaaatccagaaagaacatcgtaatctacttcaggaactaaaagtcattcaagaa
aatgaacatgctcttcagaaagatgcacttagtgttaagttgaaacttgagcaaatagat
ggccacattgctgaacataattctaaaataaaatactggcaaaaagagatttcaaaaata
aaattgcatcctgtagaagataatcctgttgagacagtgtcagttctaagcccagaggat
cttgaggcaatcaaggatccaggttctataacaaatcagattgcacttttggaaactcaa
tgtcatgaaatgaaaccaaatcttggtgccattgcagagtataaaaaaaaggaagaatta
tatttgcaaagagtagcagagttggacaaaattacttctgaaagagataattttagacaa
gcatatgaagatcttcgaaaacaaagactgaatgaatttatggcaggtttttatgtaata
acaaataaattaaaggaaaactaccagatgctgactttgggaggggatgctgaactagag
cttgtggatagtttggatcccttttcagaaggaatcatgttcagtgttcgaccacctaag
aagagttggaagaagatctttaacctttcaggaggagagaaaacccttagttcattggcc
ttagtgtttgctcttcaccattacaaacccactcccctctacttcatggatgagatcgat
gcagccctggattttaaaaatgtgtccattgttgcattttacatatatgaacaaacaaaa
aatgcccagttcataataatttctcttcggaataatatgtttgaaatttccgatagactt
attggaatttataaaacatacaatattacaaaaagtgttgctgtgaacccaaaagaaatt
gcatctaaaggacttggctga
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