Peromyscus maniculatus bairdii (prairie deer mouse): 102911825
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Entry
102911825 CDS
T11302
Symbol
Crnkl1
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102911825 (Crnkl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmav03041
]
102911825 (Crnkl1)
03036 Chromosome and associated proteins [BR:
pmav03036
]
102911825 (Crnkl1)
Spliceosome [BR:
pmav03041
]
Complex B
Other components
Prp19-related factors
102911825 (Crnkl1)
Complex C
102911825 (Crnkl1)
Chromosome and associated proteins [BR:
pmav03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
102911825 (Crnkl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT
TPR_14
Suf
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_17
Mad3_BUB1_I
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
102911825
NCBI-ProteinID:
XP_006984539
Ensembl:
ENSPEMG00000000073
LinkDB
All DBs
Position
4:complement(124058782..124075268)
Genome browser
AA seq
693 aa
AA seq
DB search
MAASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDEEELN
DYKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLK
YAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQP
EEQAWHSYINFELRYKEVERARTIYERFVLVHPAVKNWIKYARFEEKHAYFAHARKVYER
AVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKK
FGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANV
PPIQEKRHWKRYIYLWINYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQ
FEIRQKNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCT
SWIKFAELETILGDIDRARAIYELAISQPRLDMPEVLWKSYIDFEIEQEETERTRNLYRQ
LLQRTQHVKVWISFAQFELSSGKEGSVTKCRQIYEEANKTMRNCEEKEERLMLLESWRGF
EDEFGTLSDKERVDKLMPEKVKKRRKVQADDGSDAGWEEYYDYIFPEDAANQPNLKLLAM
AKLWKKQQQEKEAAEQDPDKDIDESESSSFKML
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatctacagcggccgggaaacagcggatccccaaagtggccaaggtgaaaaac
aaagcgccagccgaggtacagataactgccgagcagctcttaagagaggctaaagagaga
gagctcgagctccttccacccccgcctcagcagaagatcacagacgaagaggagctcaat
gattacaaactgcggaagaggaagacttttgaagataacataaggaaaaacaggactgtg
attagtaactggataaagtatgcacaatgggaagaaagtctaaaggaaattcaaagggct
cgatccatatacgagcgtgccttagatgtagactatcggaatattacactctggctgaaa
tacgcggaaatggaaatgaagaaccgccaggtcaaccatgcccgaaatatctgggaccga
gccataacaaccctgccccgagtcaaccagttctggtacaagtacacatacatggaggag
atgttgggcaatgttgccggtgcccgtcaggtgtttgagcgctggatggaatggcagcct
gaggagcaggcctggcactcctacatcaacttcgagctgagatacaaagaggtggagcgg
gcccgtaccatttatgaacgctttgtgctcgtgcaccctgctgtgaagaactggatcaag
tacgcccgattcgaggagaagcacgcttactttgcccatgcacggaaagtctacgagaga
gcagtggagttctttggagatgagcatatggatgaacacctgtatgtggcctttgccaaa
tttgaggaaaatcagaaagaatttgaaagggtacgagttatctacaaatatgccctggac
agaatttcaaaacaagaggcccaagaactctttaaaaactataccatctttgagaagaag
tttggtgaccggaggggtattgaagacatcatcgtgagcaaacggagattccagtatgaa
gaagaagtgaaggctaatccacacaattacgacgcatggtttgattacttgcgcttggtg
gaaagtgatgccgaagctgacactgtgcgggaagtctacgagagggccattgccaacgtg
ccgcccatccaggagaagaggcactggaagcgctacatctatctctggatcaactatgca
ctctacgaagagctggaagccaaggatcctgagaggacaagacaggtatatcaagcgtct
ttggaactgattcctcacaaaaagttcacgtttgccaaaatgtggttatattatgcacag
tttgaaatacgacagaaaaatctgccatttgccagaagagctttggggacttccataggc
aaatgtccaaagaacaagttattcaaaggttatatagaactggaactacagcttcgagaa
tttgacagatgccggaagctttatgaaaagttcttggaatttggacctgagaattgtacc
tcatggattaagtttgcagaattagagacaatccttggtgatattgatagagcccgggca
atctatgaattagccatcagccagccacgcttagacatgccagaggtactttggaaatca
tatattgattttgagattgagcaggaagaaacggaaagaacacgaaacctttaccgacag
ttgcttcagagaacacagcatgtcaaggtatggatcagttttgctcagtttgagttatcc
tcggggaaagaaggaagtgtgactaaatgcagacagatttatgaagaggctaataaaacc
atgagaaactgtgaagaaaaagaagagagactcatgttgctggaatcctggcgaggtttt
gaagatgaatttggaacactatcagacaaggaaagagtagacaaactcatgccagaaaag
gtcaagaagagaagaaaggtccaggccgacgatgggtctgatgccgggtgggaagaatac
tatgattacatctttccagaggatgctgccaaccagcctaacctcaagcttctggcaatg
gccaagctttggaagaaacagcaacaagaaaaagaagctgccgaacaggatccagataag
gacattgatgagagtgaatcctcatcttttaaaatgttgtaa
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