Peromyscus maniculatus bairdii (prairie deer mouse): 102915417
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Entry
102915417 CDS
T11302
Symbol
Sec24d
Name
(RefSeq) protein transport protein Sec24D isoform X3
KO
K14007
protein transport protein SEC24
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102915417 (Sec24d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmav04131
]
102915417 (Sec24d)
Membrane trafficking [BR:
pmav04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
102915417 (Sec24d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
102915417
NCBI-ProteinID:
XP_006991942
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All DBs
Position
6:102970466..103072169
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AA seq
1093 aa
AA seq
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MCLWNASALGLDPRPLGAKWLSAMSPPPPLLAAESGFCNLVFWGFSAVALLWNDSFIMSQ
QGYVATPPYSQSQPGMGLSPPHYGHYGDPSHVTSPPGMMKPSGPLGGAAAPSGLLPPGSL
PPGPPQFGPNGAHAPGHPPQRFPGPPPVNNVAPSYASGQPLPQSSYPGPGSTSSVTQLGS
QFSSMQINSYGVGMTPQSQGPPGPQSAGSFQGPPQPPQPSILQPGSQVLPPPPTTLNGPG
ASPMAPPTHRQDGLPGPNPLNAQYHQPPPPAGQSLGAGYPAQPAASYGPQMGGAQLAYPG
GFPGGPAQMAGPPPQVQRKLDPDSIPSPIQVIESDRATRGGQVYTTNTKGQVPPLVTTDC
VIQDQGHSSPRYIRCTAYCFPCTSDMAKQAQIPLAAVIQPFADIPSNETPLYLVNHGESG
PVRCNRCKAYMCPFMQFIEGGRRFQCGFCSCVNDVPPFYFQHLDHIGRRVDHFEKPELSL
GSYEYVATLDYCRKNKPPKPPAFIFMIDVSYSNIKNGLVKLICEELKTVLQRLPKEEHEE
TSAIRVGFITYNKVLHFFNVKSNLAQPQMMVVTDVGEVFVPLLDGFLVNYQESQSVIHNL
LDQIPEMFANSNENETVFAPVIQAGMEALKAAECPGKLFIFHSSLPTAEAPGKLKNRDDK
KLVNTDKEKILFQPQTAVYESLAKDCVANSCSVTLFLFPSQYVDVASLGLVPLLTGGTLY
KYNAFQVNLDSQQFLNDLRNDIGKKIGFDAIMRVRTSTGFRATDFFGGIFMNNTTDVEMA
AIDCDKAVTVEFKHDDKLSEDVGALIQCAVLYTTISGQRRLRIHNLALNCSTQLADLYKS
CETDALVNFFAKSAFKAVLNQPLKVIREILVNQTAHMLACYRKHCASPSAASQLILPDSM
KVLPVYMNCLLKNCVLLSRPEISPDERAYQRQLVMTMGVADSQLFFYPQLLPIHTLDVKS
TVLPAAVRCSESRLSEEGVFLLANGLNMFLWFGVSSPPELIQGIFNVPSFAHINTDMTSL
PEVGSPYSQQLRMIMNNIQQKKPYSMKLIIVKQREPREMVFRQFLVEDKGLYGGSSYVDF
LCCIHKEICQLLN
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttgtggaatgcgagcgctctgggtttggatccgaggccgctcggtgccaagtgg
ctttctgccatgtcgccgccgccgccgctgcttgcagctgagtcaggtttctgcaacttg
gtgttctggggtttttctgcagtggctctcctttggaatgatagtttcataatgagccaa
caaggttatgtggcgacacccccgtattctcagtcccagcctggaatgggcctttcgccc
cctcattatggacactatggggatccgtcgcatgtaacgtctccaccaggcatgatgaag
ccatccgggcctttgggaggcgctgctgctccttcagggctattgcccccagggtcttta
cctcctggacccccacagtttggcccaaatggagcccatgccccaggccatcctccccaa
agatttccaggacccccacctgtcaataacgtggcgccctcttatgcatccggacagccc
ctgccacagtcatcttacccaggtcctgggtccacttcctctgtcacccagctgggcagc
cagtttagctccatgcagatcaacagctatggtgtgggcatgactccccagagccagggt
cctcctggccctcagtcagcaggctccttccaggggcctccacagcctccacagccatct
attttgcagccaggatctcaggttctaccaccaccccccaccaccctgaatggccctggt
gcctctcctatggctccaccaacccacaggcaggatggacttcctggacctaatcctctg
aatgcccagtaccaccagcccccacctccagcaggccagagcctgggtgctggctaccct
gcacaaccagcagccagctatggaccacagatgggaggtgcacagctggcttacccagga
ggcttccctggagggcctgcacagatggctggaccaccaccacaggtccagaggaagctg
gatcccgactccatccccagccctattcaagtgatcgagagtgacagggccaccagaggc
ggacaagtctacactaccaacaccaaaggccaggtgcctcccctggtcaccacggactgc
gtgattcaagaccaaggccactcgagtccccggtatattcgctgcaccgcgtactgcttc
ccgtgcacatcagacatggctaagcaggctcagatccccctggctgctgtcatccagccc
ttcgctgacatcccgtcaaacgagacgcccctgtacttggtaaatcacggtgagagcgga
ccagtgcggtgcaacaggtgcaaagcctacatgtgcccgttcatgcagttcattgaaggc
ggcaggcgcttccagtgcgggttttgcagctgtgtgaatgacgttcctccattctatttc
caacatctggaccacattggaaggagagtggaccactttgagaagccagagctgtcgctg
ggatcctatgaatacgttgcaacgctggactactgcagaaagaataagccgcccaagccc
ccagcctttatcttcatgattgacgtctcctacagtaacataaagaatggactggtcaag
ctcatctgtgaagagctgaagactgtgctgcagagactgcccaaggaggagcatgaggag
acatctgcgattcgagttggctttatcacatacaacaaagtcctgcacttcttcaacgtg
aagagtaatttggcccaacctcagatgatggtggtgaccgatgtgggagaggtctttgtt
cctttgttggatggcttccttgtcaactatcaagaatctcaatccgtgattcacaatttg
ttggaccagattcctgagatgtttgccaactctaacgaaaacgagaccgtctttgctcct
gtcatccaggccggcatggaagcactgaaggcagccgagtgccctgggaagctgttcatc
ttccactcctccttgcctactgcagaagcaccaggaaagctcaagaacagagacgacaag
aagctggtgaacacagacaaagagaagatacttttccagccccaaacagctgtctacgag
tctctggccaaggactgtgtggccaacagctgctcggtgaccctcttcctctttcccagt
cagtatgtggacgtggcttccttggggctggttcctctgctcacgggaggaactctttac
aagtacaatgcttttcaggtaaatttggatagccagcagtttttgaatgacctccgaaac
gatattggaaagaaaataggcttcgatgctattatgagggttcgtaccagcacaggtttc
agggccactgatttctttggtggaatatttatgaacaacaccacggatgtagaaatggca
gccattgactgtgataaggccgtgactgtggagttcaagcacgatgacaagctcagtgag
gacgttggagccttgatccagtgtgctgtgctctacacgaccatcagcggtcagcgaaga
cttcggatccacaatctcgccttaaactgcagcacccagctggcagatctctacaagagc
tgtgaaacggatgcccttgtcaacttctttgccaagtcagcttttaaagcagttttgaac
cagcctttgaaggtcatccgggaaattctagttaatcagactgcccatatgttggcgtgt
tacaggaagcactgtgccagtccatctgcagcaagccagcttatactgccagattccatg
aaagtactgcctgtgtacatgaactgcttgttaaaaaactgcgtgctgctcagtagacca
gagatctcccctgacgagcgggcataccaacggcagctggtcatgaccatgggcgtggct
gactcccagctcttcttctatccccagctcctgcctatccacacactagatgtgaagagc
acagtcctgcctgccgctgttcgctgctctgagtcccgactctccgaagaaggagtgttc
ctgctggccaatggcctgaacatgttcttatggttcggagtgagcagcccaccggagctg
attcaagggatatttaatgtgccatcgtttgcacatatcaacacagatatgacatcgctg
cctgaggtgggaagtccatactctcaacaactcagaatgataatgaataatatccagcaa
aagaagccatactcaatgaagctcatcatcgtgaagcagcgagagccgcgggagatggtt
ttccgacagttcctggtggaagataaaggactctatggcggatcctcttacgtggatttc
ctctgctgtatccacaaggagatctgccagctgcttaactga
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