Peromyscus maniculatus bairdii (prairie deer mouse): 102919368
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Entry
102919368 CDS
T11302
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
102919368
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmav04040
]
102919368
Ion channels [BR:
pmav04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102919368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
ATP-synt_B
GPHH
IQ
IQCJ-SCHIP1
FraC
HB_ELP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
102919368
NCBI-ProteinID:
XP_015851489
Ensembl:
ENSPEMG00000002426
UniProt:
A0A8C8T2E0
LinkDB
All DBs
Position
4:43347851..43481767
Genome browser
AA seq
2005 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAISRFSATSALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFEINITSFFNNSL
DWNGTAFNRTVNMFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESRDFSGAGGI
GVFSESSSVASKLSSKSEKELKNRRKKRKQKEQAGEEEKEDAVRKSASEDSIRKKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFKGRVKDIGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRPSNVSQASRASRGIPTLPMNGKMHSAVDCNGVVSLVGGP
SALTSPVGQLLPEGTTTETEIRKRKSSSYHVSMDLLEDPSRQRAMSMASILTNTMEELEE
SRQKCPPCWYKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEH
YPMTEQFSNVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVSLSLMELGL
ANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGM
QLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCL
TVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQRGIDFVKRK
IREFIEKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIGS
SVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATSS
SEGSTVDIGAPAEGEQPEAEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLRKT
CYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLLK
WVAYGFQMYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRF
EGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSVV
NNFSECQALIENNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVELQ
PKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNA
MKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEMT
NILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFV
SPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMS
NFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPGS
SVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYE
VWEKFDPDATQFIEFCKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFA
FTKRVLGESGEMDALRVQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRRYL
LKQKVKKVSSIYKKDKSKEGEGTPIKEDIIIDKLNENSTPEKTDVTPSTTSPPSYDSVTK
PEKEKFEKDKSEKEDKGKDIRESKK
NT seq
6018 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatccgtgctggtaccgccaggacctgacagcttccgcttctttaccagggaa
tcccttgctgctattgaacaacgcattgcagaagagaaagccaagagacccaaacaggaa
cgcaaggatgaagatgacgaaaatggccccaagccaaacagtgacttggaagcaggaaaa
tcccttccttttatttatggagacattcctccagagatggtgtcagagcccctggaggac
ctggacccctactatatcaataagaaaacctttatagtattgaataaagggaaggccatc
tcccggttcagtgccacctccgccctgtacatcctcactcccttcaaccccattagaaaa
ttagctattaagattttggtacattctttattcaatgtgctcattatgtgcacaattctt
accaactgtgtatttatgaccatgagtaatcctccagactggacgaagaatgtggagtat
acttttacaggaatttatacttttgaatcacttattaaaatactcgcaaggggcttttgt
ctagaagatttcacatttctacgggacccctggaattggttggatttcacagtcattacc
ttcgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacgttcaga
gttctccgagcattgaaaacaatttcagtcattccaggcctgaagaccatcgtgggggcc
ctgatccagtcggtgaagaagctgtctgacgtcatgatcctcactgtgttctgtctcagt
gtctttgccctaatcggcctgcagctcttcatgggcaacctgaggaataaatgcttgcag
tggcccccagacaattctacctttgaaataaatatcacttccttctttaataactcattg
gactggaatggtactgccttcaatagaacggtgaacatgtttaactgggatgaatatatt
gaagataaaagtcacttttattttttggaagggcaaaatgatgctctgctttgtgggaac
agctctgatgcaggccagtgtcctgaagggtacatctgtgtgaaggctgggcgaaacccc
aactacggctacacgagcttcgacacatttagctgggccttcttgtcgttatttcgtctc
atgactcaagacttctgggaaaacctttatcagctgaccctacgtgctgctgggaaaaca
tatatgatattttttgtgctcgtgattttcttgggctcgttctacctaataaacttgatc
ctggctgtagtggccatggcctatgaggaacagaatcaggccaccttggaggaggctgaa
cagaaagaggcggagtttcagcagatgttggagcagttgaagaagcaacaggaggaggct
caggcagcagccgcagccgcatctgcagaatccagagacttcagcggagcaggtgggata
ggcgtgttctcggagagttcttcggtagcatcaaagctgagttccaagagtgaaaaggag
ctgaaaaacagaagaaagaaaaggaaacagaaagagcaggctggagaggaagaaaaggaa
gacgcggtgcggaaatcggcctctgaggacagcatacgcaagaaaggcttccggttttca
ctagaaggaagtaggctgacctatgagaagaggttttcttctccacaccagtctctattg
agcatccgaggctcccttttctctccaagacgcaacagtagagcaagccttttcagcttc
aaaggtcgagtgaaggatattggttctgaaaatgactttgcagacgatgaacacagcacg
ttcgaggacaacgacagcagaagagactctctgtttgtaccacacagacatggagaaagg
cgtcccagcaatgtcagccaggccagccgtgcctcccgaggaatacccacgctacccatg
aatggaaagatgcacagtgcagtggactgcaatggcgtggtgtctctggttggaggccct
tctgccctcacatctcctgtagggcagctactaccagagggcacaactactgaaacagaa
ataagaaagagaaagtccagttcttaccatgtatccatggacttgttggaagacccttcg
aggcaaagagcaatgagtatggccagcattttgaccaacacaatggaagagcttgaagaa
tccagacagaaatgcccaccttgctggtacaaatttgctaatatgtgcctgatttgggac
tgctgtaagccatggttaaaggtaaaacaccttgtcaatctggtagtgatggacccattt
gttgacctggctatcaccatctgcatcgtgttaaatacgctcttcatggccatggagcat
taccccatgacggagcagttcagcaatgtgctgtctgtcgggaatttggtcttcaccggg
atcttcacagcagaaatgttcctcaagataatagctatggatccatattactacttccaa
gaaggctggaatatctttgatggcttcattgtaagccttagtttaatggaactcggcttg
gccaacgtggaaggattgtcagttctccgatcattccggctgcttagagtcttcaagttg
gcaaaatcctggcccacactgaatatgctcattaagatcatcggtaactcggtgggtgca
ctgggcaacctgaccctggtgttggccatcattgtcttcatttttgccgtggttggcatg
cagctgtttggaaagagctacaaggagtgtgtctgcaagatttccaatgattgtgagctt
ccacgctggcacatgcatgacttcttccactccttcctgatcgtgttccgtgtgctgtgt
ggagagtggatagagaccatgtgggactgcatggaggtcgccggccagaccatgtgtctc
actgtcttcatgatggtcatggtgattggcaacctcgtcgttctgaacctcttcctggcc
ttgctcctcagctctttcagctctgacaaccttgccgccacggatgacgataacgaaatg
aacaacctccagatcgcagtgggaaggatgcaaaggggaattgattttgttaaaaggaaa
atacgtgaattcattgagaaagcctttgtcagaaagcagaaagctttggatgaaattaaa
cccttggaagacctgaataacaagaaagacagctgtatctccaaccacacgaccatagaa
ataggcaaagacctcaattatctcaaagacggaaatgggacgaccagtggcataggcagc
agcgtggagaagtatgtggtagatgagagtgattacatgtcgttcataaacaaccccagc
ctcactgtgactgtgcccattgccgttggagagtctgacttcgaaaacttaaatacggaa
gagttcagcagcgaatcagatatggaggaaagcaaagagaaattgaatgcaactagttca
tctgaaggcagtacagttgatataggtgctccagcagagggagagcagccagaggctgaa
ccagaagaatcccttgagccagaagcctgttttacagaagactgtgtgagaaagttcaag
tgttgtcagataagcatagaagaaggcaaaggcaagctctggtggaacttgaggaagacc
tgctacaagatcgtggaacacaattggttcgagaccttcatcgtcttcatgatcctgctc
agcagcggtgctctggcctttgaagacatatatatcgagcagcgaaagaccatcaagacc
atgttggagtatgctgacaaggttttcacttacatcttcatcctggagatgcttctaaag
tgggttgcttatggtttccaaatgtattttaccaatgcctggtgctggctggacttcctg
attgttgatgtatcattggttagcttaactgcaaatgcgttgggttattcagaacttggt
gccatcaaatccctcagaacgttaagagctctaaggcctctcagagccttatcccggttt
gaaggaatgagggttgttgtaaatgctcttctgggtgccatcccatccattatgaatgta
cttctggtctgcctgatcttttggctaatattcagtatcatgggagtgaatctctttgct
ggcaagttctatcattgcatcaactataccaccggggaaatgtttgacgtgagtgtggtc
aacaacttcagtgagtgccaagcgctcatcgagaacaaccagacagccaggtggaagaat
gtgaaagtcaacttcgataatgtgggacttggatatctttctctgcttcaagtagccaca
tttaaaggatggatggacatcatgtatgcagctgttgactcaagaaatgtagaattgcaa
cccaaatatgaagacaatctctacatgtacctttacttcgtcatcttcattattttcggc
tcattcttcacactgaatcttttcattggtgtcatcatagacaacttcaaccaacagaaa
aagaagtttggaggtcaagacatctttatgacagaagaacagaagaaatactacaatgca
atgaagaagctgggatccaagaaacctcaaaaacccatacctcgacctgctaacaaattt
caagggatggtctttgattttgtaaccaaacaagtctttgacatcagcatcatgatcctc
atctgcctcaacatggtcaccatgatggtggaaactgacgaccagagtcaggagatgacc
aacatactgtactggatcaacctggtgttcatcgtgctgttcactggcgagtgtgtgctg
aagctcatctccctccgctattactatttcaccattgggtggaatatttttgattttgtg
gtggtcattctctccattgtaggaatgtttctggccgagctgatagagaagtactttgtg
tcccctaccctgttccgagtcatccgcttggccaggattggcagaatcctacgcttgatc
aaaggcgccaaggggatccgcacgctgctttttgctctgatgatgtcccttcctgcgctg
ttcaacatcggcctcctgcttttcctggtcatgttcatctatgccatctttgggatgtcc
aactttgcctacgttaagagggaagttgggattgatgacatgttcaattttgagaccttc
ggcaacagcatgatctgcctgtttcaaatcaccacctctgcaggctgggacggtctactg
gcacctatattaaatagtggacctcccgactgtgatcctgaaaaagatcaccctggaagc
tcggtgaagggggattgtgggaacccatcggtggggattttcttttttgtcagctacatc
atcatatccttcctggttgtggtgaacatgtacatcgctgtcatcctggagaacttcagc
gtcgccactgaggaaagtgcagagcccctgagtgaggacgactttgagatgttctatgag
gtctgggagaagttcgaccctgatgccactcagttcattgagttctgcaagctctctgac
tttgcggctgccctggatcctccccttctcatcgcgaagcccaacaaagtccagctcatt
gccatggatctgcccatggtgagcggagaccgcatccactgcctggacatcttatttgct
tttacaaagcgggttttgggtgagagcggagagatggacgcccttcgagtccagatggaa
gaacggttcatggcttccaacccctccaaagtctcctatgagccgattaccaccacgttg
aaacgcaaacaagaggaggtgtctgccatcgtcattcaaagagcgtacaggcgctatctc
ctgaagcagaaggttaagaaagtttcctctatatataaaaaggacaagagcaaagagggt
gagggaacgcccatcaaagaagacatcatcatcgataaactaaatgagaattcaacccca
gagaaaactgacgtgacaccttccaccacgtctccaccttcctacgacagcgtgaccaaa
ccggagaaggaaaaatttgaaaaggacaaatcggaaaaggaggacaaagggaaagatatc
agggaaagtaaaaagtaa
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