Peromyscus maniculatus bairdii (prairie deer mouse): 102921662
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Entry
102921662 CDS
T11302
Symbol
Sema4c
Name
(RefSeq) semaphorin-4C
KO
K06521
semaphorin 4
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
102921662 (Sema4c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pmav04090
]
102921662 (Sema4c)
CD molecules [BR:
pmav04090
]
Proteins
102921662 (Sema4c)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
I-set
Sema4F_C
Ig_3
Ig_2
V-set
DUF7269
Motif
Other DBs
NCBI-GeneID:
102921662
NCBI-ProteinID:
XP_006987349
Ensembl:
ENSPEMG00000016803
UniProt:
A0A6I9M011
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Position
21:40127943..40137771
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AA seq
834 aa
AA seq
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MAPHWAVWLLAAGLWGLGIGAEVWWNLVPRKTVSSGELATVVRRFSQTGIQDFLTLTLRE
HSGLLYVGAREALFAFSVEALELRGVISWEAPVEKKMECTQKGKSNQTECFNFIRFLQPY
NASHLYVCGTYAFQPKCTYIDMITFTLERGEFEDGKGKCPYDPAKGHTGLLVDGELFSAT
LNNFLGTEPVILRNMGPHHSIKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFS
ERAVEYDCYAEQVVARVARVCKGDMGGARTLQKKWTTFLKAQLVCSAPEWKVYFNQLRAV
HTLLGTSWHNTTFFGVFQARWGDMDLSAICEYQLEQIQQVFEGPYKEYSEQAQKWARYTD
PVPSPRPGSCINNWHRHNGYTSSLELPDNILNFIKKHPLMEEQVRPRWDRPLLVKKNTNF
THVVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHMVEELQVFDQEPVESLVLSRS
RKMLFAGSRSQLVQLPLTDCTKYRFCADCVLARDPYCAWNVNTSRCVATTGAHSGSLLVQ
HVMNLDTSKICNQYGIKKVRPTPKNITVVTGTDLVLPCHLSSNLAHARWTFRGRDLTAEQ
PGSFLYDRGLQALVVMAAQPRHTGPYHCYSEEQGTRLAAESYLVSVVAGPSVTLEARAPL
ENLGLVWLAVVALAAVCLVLLLLVLSLRRRLREELEKGAKAAERTLVYPLEMPKEPTSPP
FRPGPETDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLG
GGQNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEESSV
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggccccacactgggctgtctggctgctggcagcagggctgtggggcctgggcattggg
gctgaggtgtggtggaaccttgtgccccggaagacagtatcttctggggagctggccaca
gtagtaaggcggttctcccagacgggcatccaggacttcctgaccttgaccctgagagag
cactctgggcttttatatgtgggggcccgagaggcgctgtttgccttcagcgtggaggct
ctggagctgcgaggcgtgatctcctgggaggccccggttgagaagaagatggagtgtacc
cagaaagggaagagcaaccagaccgaatgcttcaacttcatccgcttccttcagccgtac
aatgcctcccacctgtacgtctgtggtacctatgccttccagcccaagtgcacctacatc
gacatgatcactttcaccttggagcggggagaatttgaggacgggaagggtaaatgtccc
tatgacccagctaagggccacactggactgcttgtggatggtgagttgttctcagccaca
ctcaacaacttcctgggtacagagcctgtcatcctgcgaaatatggggcctcaccactcc
atcaagaccgagtacctggcgttttggctgaatgaaccccactttgtaggctctgcctac
gtccccgagagtgtggggagcttcacgggggacgatgacaaggtctacttcttcttcagc
gagcgggcagtggagtatgactgctatgccgagcaggtggtggcccgtgtggctcgagtc
tgtaagggagacatggggggcgcacggaccctgcagaagaagtggacaacgttcctaaaa
gcgcagttggtgtgctcagccccggagtggaaggtctacttcaaccagcttcgggcagtg
cacaccctgctgggtacctcttggcacaacaccaccttcttcggggtctttcaagcgcga
tggggtgatatggacctgtccgcaatctgtgagtaccagttggaacagatccagcaggtg
ttcgagggtccctacaaagagtacagtgagcaagcccagaagtgggcccgctacactgac
ccggtccccagtcctcgccctggttcgtgtatcaacaattggcatcgccacaacggctac
accagttctctggagctgcccgacaacatcctcaacttcatcaagaagcacccgctgatg
gaggagcaggtgaggcctcggtgggaccgccccttacttgtgaagaagaacactaacttc
acgcacgtggtggccgacagggtcacgggacttgatggcgccacctatacagtgctgttc
attggtacaggggatggctggctgctgaaggctgtgagcctggggccctgggtccacatg
gtagaggaactgcaggtgtttgaccaggagcctgtggagagtctggtgctgtctcggagc
aggaagatgcttttcgctggctcccgctctcagctggttcagttacccctgactgactgc
acaaagtaccgcttctgtgcagactgcgtcctcgcccgggacccctactgtgcctggaat
gtcaacaccagccgctgtgtggccaccactggtgctcactcaggatcccttctggtccaa
catgtgatgaacttggacacctcaaagatctgtaaccagtatggcattaaaaaagtcaga
cctacccccaagaacatcacagtagtcacaggcacagacctggttctgccctgccacctc
tcatccaatttggcccacgctcgctggaccttcagaggccgggacctgactgcagagcaa
cccggctccttcctctatgacagaggactccaggccctggtagtgatggctgcccagccc
cgccacaccgggccctatcactgctattcggaggagcaggggacaaggctggctgcagaa
agctaccttgtctctgtcgtggctggcccgtcagtgaccctggaggcccgggctcccttg
gaaaacctggggctcgtatggctcgctgtggtggctctggcggccgtgtgcctggtgttg
ctgctgctggttctgtcccttcgtcggcgacttcgagaagagctcgaaaaaggtgccaag
gcagccgagaggacactggtgtaccccctagaaatgcccaaggaaccaaccagccccccg
tttcgccccggccccgaaacagatgagaaactttgggatcccgtcggctactactattca
gatggctctctcaagatcgtgcctggccatgcccggtgccagcctgggggtgggccccct
tctccaccgcctggcatacctggccagcccctgccttctccgactcggcttcacctaggg
ggtggtcagaactcaaacgccaatggttacgtgcgcttacagctgggaggggaggaccga
ggaggacttgggcacccactgccggagctcgccgatgaactgcgacgcaagctacaacag
cgccagccactgcctgactccaacccagaggagtcctcagtatga
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