Peromyscus maniculatus bairdii (prairie deer mouse): 102922708
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Entry
102922708 CDS
T11302
Symbol
Snx18
Name
(RefSeq) sorting nexin-18 isoform X1
KO
K17923
sorting nexin-9/18/33
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102922708 (Snx18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmav04131
]
102922708 (Snx18)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pmav04990
]
102922708 (Snx18)
Membrane trafficking [BR:
pmav04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
102922708 (Snx18)
Macropinocytosis
Sorting nexins
102922708 (Snx18)
Domain-containing proteins not elsewhere classified [BR:
pmav04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
102922708 (Snx18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_9
SH3_2
SH3_1
Vps5
BAR
XFP
Motif
Other DBs
NCBI-GeneID:
102922708
NCBI-ProteinID:
XP_076407995
LinkDB
All DBs
Position
15:42082824..42123346
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AA seq
618 aa
AA seq
DB search
MALRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGINSRGDRGLFPASYVQVIR
TPEPGPPADGGPGVPARYANVPPGGFEPLPAAPPAAFQPLLQPQAPPSSFQPSGAGFPYG
GGALQPSPQQLYGGYQASQGSDDDWDDEWDDSSTVADEPGALGSGAYPDLDGSSSAGGGG
GGAPGRYRLSTRSDLSLGSRGGSAPPPHQASGAKSSATVSRNLNRFSTFVKSGGEAFVLG
EASGFVKDGDKLCVVLGPYGPEWQENPYPFQCTIDDPTKQTKFKGMKSYISYKLVPTHTQ
VPVHRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEEDFISKRRKGLIWWMNHMASH
PVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAALDLQEVES
KIDGFKCFTKKMDDSALQLNHTANEFARKQVTGFKKEYQKVGQSFRGLSQAFELDQQAFS
VGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFPDIIHVQKGALTKV
KESRRHVEEGKMEVQKADGIQDRCNTISFATLAEIHHFHQIRVRDFKSQMQHFLQQQIIF
FQKVTQKLEEALHKYDSV
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcgcgcccgggcactctacgacttcaggtcggagaaccccggcgagatttct
ctgcgggagcacgaggtgttgagcctgtgcagcgagcaggacatcgagggctggctcgaa
gggatcaacagccgcggcgatcgcggcctcttcccggcctcgtacgtgcaggtgatccgc
acgcccgagcccggccctccggccgacggcggccccggagtcccggcccgctacgccaac
gtgccgcccggtggcttcgagcctctgcccgccgctccgcccgccgccttccagccgctg
ctgcagccgcaggcgccgccgagttccttccagccgtcgggcgccggcttcccgtacggc
gggggcgccctgcagccgtcgccgcagcagctgtacggcggctaccaggccagccagggc
agcgacgatgactgggacgacgagtgggacgatagctccacggtggccgacgagccgggc
gcgctgggcagcggcgcctaccccgacctcgacggctcgtcctcggctggcggcggcggc
ggcggcgcgcctggtcgctaccgcctgtccacacgctccgatctgtcgctgggctcacgg
ggtggctcggcgccgccgccgcatcaagcgtccggagccaagagctcggccacggtgagc
cgcaacctcaatcgcttctccaccttcgtcaagtcgggcggggaggccttcgtgctgggc
gaggcgtcgggcttcgtgaaggacggggacaagctgtgcgtggtgctggggccctacggc
cccgagtggcaggagaacccctaccctttccagtgcaccatcgacgaccccaccaagcag
accaagttcaagggcatgaagagctacatctcttacaagctggtgcccacgcacacccag
gtgcccgtgcacaggcgctataagcatttcgactggctgtacgcgcgcctggccgagaag
ttccccgtcatctcggtgccccacctgcctgagaagcaggcaaccgggcgcttcgaggag
gacttcatctccaagcgcaggaagggcctgatctggtggatgaatcacatggccagccac
ccagtgctggcgcagtgcgacgtcttccagcatttcctgacctgccccagcagcacggac
gagaaggcctggaaacagggtaagcgaaaggctgagaaggatgagatggtgggcgctaac
ttcttcctcactctgagcacaccccctgccgccgccctggacctgcaggaggtggagagc
aagatcgatggcttcaagtgcttcaccaagaagatggacgacagcgcgctgcagctcaac
cacactgccaacgagtttgcgcgcaagcaggtgaccggcttcaagaaggagtatcagaag
gtgggccagtccttccgaggcctcagccaagcctttgagctggatcagcaggccttctcg
gtgggtctgaaccaggccatcgccttcaccggagatgcctacgacgccataggcgaactc
ttcgctgagcagcccaggcaggacctggacccagtcatggacctgttagcactgtatcag
gggcacctggccaacttcccagacatcatccatgtgcagaaaggagctcttaccaaagtg
aaggagagtaggcgacatgtggaagaaggcaagatggaagtccagaaagctgacggcatc
caagaccgctgtaacaccatttctttcgccacgttggccgagattcatcacttccatcag
attcgagtgagagactttaaatcacagatgcagcattttttacaacaacaaataatattt
ttccaaaaagtgacccagaagttggaagaagctcttcacaaatacgacagcgtctag
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