Peromyscus maniculatus bairdii (prairie deer mouse): 102922761
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Entry
102922761 CDS
T11302
Symbol
Sema4d
Name
(RefSeq) semaphorin-4D isoform X1
KO
K06521
semaphorin 4
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
102922761 (Sema4d)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pmav04090
]
102922761 (Sema4d)
CD molecules [BR:
pmav04090
]
Proteins
102922761 (Sema4d)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
ig
Ig_3
I-set
Ig_5
Ig_2
D8C_UMOD
Motif
Other DBs
NCBI-GeneID:
102922761
NCBI-ProteinID:
XP_006976911
Ensembl:
ENSPEMG00000020153
LinkDB
All DBs
Position
5:complement(132305639..132410676)
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AA seq
859 aa
AA seq
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MCAPVGGLFLALMVVLGTVVAFAPVPRITWEHGEVGLMQFHEPGIFNYSALLMSEDKDTL
YVGAREAVFAVNALNVSKKQHEVYWKVSEEKKAKCAEKGKSKQTECLNYIRVLQPLGTTA
LYVCGTNAFQPTCDHLNLTSFKFLGKSEDGKGRCPFDPAHSYTSVMVGGELYSGTSYNFL
GSEPIISRNSSSSPLRTEYAIPWLNEPSFVFADVIQKSPDGTEGDDDKVYFFFTEVSVEY
EFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSRPDSGLVFNILQDVFVLRAS
DLKEPVFYAVFTPQLNNVGLSAVCAYTLATVEAVFSRGKYMQSATVEQSHTKWVRYNGPV
PSPRPGACVDSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPIDNRPKLIKKDVNYTQ
IVVDRTQALDGTFYDVMFISTDRGALHKAVILGKEVHVVEETQLFQDSEPVQTLLLSSKK
GRRSVYAGSNSGVAQAPLAFCGKHGSCEDCVLARDPYCAWSPASKACVLHQAEDSNRGLI
QEMSGDTSSCLDKSKESSHQHSLKHGGTAELKCFQKSNLARVVWKFQNGELKAVSPKYGF
VGRKHLLIFNLSEGDSGVYQCLSEERVRNKTVSQLLAKHVLEVKVVLQTPTSPASQAAHT
EGSRITSKMPVASTQGSSPPTPALWATSPRAATLPPKSSSTGTSCEPKMVINTVPQLHAE
KTVYLKSSDNRLLMSLLLFIFVLFLCLFSYNCYKGYLPGQCLKFRSALLLGKKKPKSDFS
DLEQSVKETLVEPGSFSQQNGDQPKPALDTGYETEQDTITSKVPTDREDSQRIDELSARD
KPFDVKCELKFADSDADGD
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgctcccgtcggggggctattcttggccctgatggtagtgttggggacagtggtg
gcatttgcacctgtgcctcggatcacctgggagcatggagaggtaggcctgatgcagttt
catgaaccgggcatctttaactactcagccttgctgatgagtgaggacaaagacactctg
tacgtgggcgcccgggaagctgtctttgcagtgaatgcgctgaacgtctctaagaagcaa
catgaggtgtattggaaggtctctgaagaaaaaaaagccaagtgtgcagagaaggggaaa
tcaaagcagacggagtgcctcaactacatccgagtgctgcagccactcggcaccaccgcc
ctctatgtgtgtgggaccaacgcgttccagcccacctgtgaccacctgaacttgacatcc
ttcaagttcctggggaaaagtgaagatggtaaaggaagatgccccttcgaccctgcccac
agctacacgtcagtcatggttgggggagagctctattctgggacatcgtataatttcttg
ggcagtgaacccatcatctctcgaaactcttcctccagtcccctgaggacagagtacgcc
atcccctggctgaatgagcctagcttcgtctttgctgatgtgatccagaaaagcccagat
ggtacagagggtgacgatgacaaggtctacttcttcttcacggaggtgtctgtggagtac
gagttcgttttcaagttaatgatcccacgagtcgccagggtgtgcaagggggaccagggc
ggccttcggactttgcaaaagaagtggacctccttcctaaaggccaggctgatctgctcc
aggccagacagtggcctggtcttcaacatactgcaggatgtctttgtgctgcgggcctca
gacctcaaggagcctgtgttctacgcagtcttcaccccacagttgaacaatgtgggtctg
tcagcagtttgtgcctataccctggccacggtggaggcagtcttctcccgtggaaagtac
atgcagagtgccacggtggagcaatctcacaccaagtgggtgcgctacaatggcccagtg
cccagtccccggcctggagcgtgcgtcgacagcgaggctcgggcagccaactacaccagc
tctttgaatctcccagacaaaacgctgcagttcgtaaaagaccaccctttgatggacgac
tcggtgaccccgatagacaacaggcccaagctaatcaaaaaggatgtaaactacacccag
atagtggtagacaggactcaggccctggatgggaccttctacgacgtcatgtttatcagc
acagaccggggagctctgcataaagctgttatccttgggaaggaggtgcacgtggttgag
gagacccagctcttccaggactctgagccagtccaaactctgctgctgtcatcaaagaag
gggaggaggtctgtctatgctggctccaactcgggagtggcccaggctcccctggccttc
tgtggaaagcatggtagctgtgaggattgcgtcctggcacgggacccctactgcgcctgg
agcccagcctccaaggcctgtgttttgcaccaggcagaggactccaacaggggcttgatt
caggagatgagtggcgacacatcctcgtgcctggataagagtaaagaaagttcccatcaa
cactctctcaagcacggtggcacagcagaactcaaatgcttccaaaaatccaacctggcc
cgggtggtgtggaagttccagaacggcgagttgaaggctgtgagtcccaagtatggcttt
gtgggcaggaagcacctgctcatcttcaacctgtcggagggagacagtggtgtgtaccag
tgcctgtcggaggaaagggtgaggaacaagacagtctcgcagctgcttgccaagcacgtc
ctggaagtgaaggtggtacttcagacccccacatcacctgcctcccaggctgctcacaca
gaaggtagtaggatcacttccaaaatgccggtggcatctacccaggggtcctctccccct
accccggctctgtgggcaacctcccccagggccgctaccctacctcccaagtcctcctcc
accggcacatcctgtgaaccaaagatggtcatcaacacggtcccccagcttcacgcagag
aagacggtgtatctcaagtccagtgacaaccgcctgctcatgtctctcctacttttcatc
ttcgtcctcttcctctgcctcttttcctacaactgctacaagggctacctgcccggacag
tgcttaaaattccgctcagccctgctgcttgggaagaagaagcccaagtcagacttctct
gacctggagcagagtgtgaaggagacgctggtggagcctgggagcttctcacagcagaat
ggcgaccagcccaagccagccctggacaccggctatgaaaccgagcaggacaccatcacc
agcaaagtgcccacagatcgcgaggactcccaacggatcgatgaactctctgccagggac
aaaccgtttgatgtcaagtgtgaactgaagtttgcggattcggatgctgacggggactga
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