Peromyscus maniculatus bairdii (prairie deer mouse): 102927968
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Entry
102927968 CDS
T11302
Symbol
Rfc2
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03030
DNA replication
pmav03410
Base excision repair
pmav03420
Nucleotide excision repair
pmav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102927968 (Rfc2)
03410 Base excision repair
102927968 (Rfc2)
03420 Nucleotide excision repair
102927968 (Rfc2)
03430 Mismatch repair
102927968 (Rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmav03032
]
102927968 (Rfc2)
03036 Chromosome and associated proteins [BR:
pmav03036
]
102927968 (Rfc2)
03400 DNA repair and recombination proteins [BR:
pmav03400
]
102927968 (Rfc2)
DNA replication proteins [BR:
pmav03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102927968 (Rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
102927968 (Rfc2)
Chromosome and associated proteins [BR:
pmav03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
102927968 (Rfc2)
DNA repair and recombination proteins [BR:
pmav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102927968 (Rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
102927968 (Rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
nSTAND_NTPase5
AAA_lid_RFC1
RCF1-5-like_lid
AAA_14
AAA_16
Viral_helicase1
Mg_chelatase
AAA_11
AAA_assoc_2
nSTAND3
RuvB_N
AAA_19
DNAX_ATPase_lid
Rad17
AAA_24
MipZ
AAA_5
AAA_18
AAA_28
ABC_tran
AAA_25
AAA_23
AAA_30
NTPase_1
MeaB
SLFN-g3_helicase
RNA_helicase
FtsK_SpoIIIE
DUF815
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
102927968
NCBI-ProteinID:
XP_076417188
Ensembl:
ENSPEMG00000008890
LinkDB
All DBs
Position
23:26170212..26213250
Genome browser
AA seq
356 aa
AA seq
DB search
MPPWGKHQPPTPEASNTNPVISLRQSLVYLRLASISQVLRVEKYRPVKLHEIVGNEDTVS
RLEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRN
KIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKII
EPIQSRCAVLRYTKLTDAQVLTRLMNVIEKEKVPYTDDGLEAIIFTAQGDMRQALNNLQS
TFSGFGYINSENVFKVCDEPHPLLVKEMIQHCVDANIDEAYKILAHLWHLGYSPEDVIGN
IFRVCKTFPMAEYLKLEFIKEIGYTHMKVAEGVNSLLQMAGLLARLCQKTMAPVAS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgccaccttgggggaaacatcagccccccacacccgaggcttctaacacaaaccctgtt
atttctctgagacagagtcttgtgtatctcaggctggcctccatctcccaagtgctgagg
gttgaaaaatacagacctgtgaagctccatgaaatagttggcaatgaagacacagtgagc
aggctggaggtctttgcaaaggaaggcaatgtgcccaatatcatcattgcgggtccccca
ggaaccggcaaaacgaccagcatcctctgcttggcgagagcactgctgggccctgccctg
aaggatgcggttctggaactcaatgcgtccaatgacaggggcattgatgtggtgaggaat
aaaatcaaaatgttcgcccagcagaaagtcacccttcccaagggccggcacaagatcatc
attctggatgaagcagacagcatgacggacggtgcccagcaggccctcaggaggaccatg
gaaatctactccaagacaacccgcttcgctctggcttgtaatgcttcagacaaaatcata
gagcccatccagtcccggtgtgcagtgctccgctacacgaagctcactgatgctcaagtc
ctcaccaggctcatgaatgtcatcgagaaggaaaaagtgccatacacagatgatggcctg
gaagccattatcttcacagcccaaggggacatgcgccaggccctgaacaacttgcagtcc
accttctcaggattcggctatatcaacagcgagaacgtcttcaaggtctgtgatgagccc
caccccctgctggtgaaggagatgatccagcactgcgtggatgccaacatcgatgaggcc
tacaagattcttgctcacctctggcacctgggctactcaccagaagacgtcatcggcaac
atcttccgagtgtgtaaaaccttccccatggccgaatacctgaagctggagttcatcaag
gagattggatacactcacatgaaagtggcggaaggtgtgaactccttgctgcagatggct
gggctcctggccaggctgtgtcagaagaccatggctccggtggccagttga
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integrated database retrieval system
