Peromyscus maniculatus bairdii (prairie deer mouse): 143270347
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Entry
143270347 CDS
T11302
Symbol
Ubc
Name
(RefSeq) polyubiquitin-C
KO
K08770
ubiquitin C
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03320
PPAR signaling pathway
pmav04120
Ubiquitin mediated proteolysis
pmav04137
Mitophagy - animal
pmav04140
Autophagy - animal
pmav05012
Parkinson disease
pmav05022
Pathways of neurodegeneration - multiple diseases
pmav05167
Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
143270347 (Ubc)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
143270347 (Ubc)
04137 Mitophagy - animal
143270347 (Ubc)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
143270347 (Ubc)
09160 Human Diseases
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
143270347 (Ubc)
09164 Neurodegenerative disease
05012 Parkinson disease
143270347 (Ubc)
05022 Pathways of neurodegeneration - multiple diseases
143270347 (Ubc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmav04121
]
143270347 (Ubc)
Ubiquitin system [BR:
pmav04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
143270347 (Ubc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
143270347
NCBI-ProteinID:
XP_076416185
LinkDB
All DBs
Position
23:complement(17022904..17028143)
Genome browser
AA seq
1113 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD
KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
VEPSATKKVKQEDGRTFLTTVSRKSTPCACSWA
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaaaaccttaactggtaagaccatcaccctagaggtcgagcccagt
gacaccatcgagaatgtcaaggcaaagatccaggacaaagagggtatcccccctgaccag
cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtctgactacaac
atccagaaagagtccactctgcacctggtcctccgtctcaggggtggtatgcagatcttt
gtgaagaccctgacaggcaagaccatcaccctggaagttgagcccagtgacaccatcgag
aatgtcaaggcaaagatccaggacaaagagggtatcccccctgaccagcagaggctgatc
tttgcaggcaagcagctggaagatggccgcactctgtctgactacaacatccagaaagag
tccaccttgcacctggtcctccgtctcaggggtggtatgcagatctttgtgaagaccctg
acaggcaagaccatcaccctggaggtcgagcccagtgacaccatcgagaatgtcaaggca
aagatccaggacaaagagggtatcccccctgaccagcagaggctgatctttgcaggcaag
cagctggaagatggtcgcaccctgtctgactacaacatccagaaagagtccaccttgcac
ctggtcctccgtctcaggggtggtatgcagatctttgtgaagaccctgacaggcaagacc
atcaccctggaggtcgagcccagtgacaccatcgagaatgtcaaggcaaagatccaggac
aaagagggtatcccccctgaccagcagaggctgatctttgcaggcaagcagctggaagat
ggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctccgt
ctcaggggtggtatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggag
gtcgagcccagtgacaccatcgagaatgtcaaggcaaagatccaggacaaagagggtatc
ccccctgaccagcagaggctgatctttgcaggcaagcagctggaagatggtcgcaccctg
tctgactacaacatccagaaagagtccactctgcacctggtcctccgtctcaggggtggt
atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt
gacaccatcgagaatgtcaaggcaaagatccaggacaaagagggtatcccccctgaccag
cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtctgactacaac
atccagaaagagtccactctgcacctggtcctccgactcaggggtggtatgcagatcttt
gtgaagaccctgacaggcaagaccatcaccctggaggttgagcccagtgacaccattgag
aatgtcaaggcaaagatccaggacaaagagggtatcccccctgaccagcagaggttgatc
tttgcaggcaaacagctggaagatggccgcactctgtctgactacaacatccagaaagag
tccactctgcacctggtcctccgtctcaggggtggtatgcagatctttgtgaagaccctg
acaggcaagaccatcaccctggaggtcgagcccagtgacaccattgagaatgtcaaggca
aagatccaggacaaagagggtatcccccctgaccagcagaggctgatctttgcaggcaag
cagctggaagatggtcgcaccctgtctgactacaacatccagaaagagtccactctgcac
ctggtcctccgtctcaggggtggtatgcagatctttgtgaagaccctgacaggcaagacc
atcaccctggaggtcgagcccagtgacaccattgagaatgtcaaggcaaagatccaggac
aaagagggtatcccccctgaccagcagaggctgatctttgcaggcaagcagctggaagat
ggccgcactctgtctgactacaacatccagaaagagtccaccttgcacctggtcctccgt
ctcaggggtggtatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggag
gtcgagcccagtgacaccatcgagaatgtcaaggcaaagatccaggacaaagagggtatc
ccccctgaccagcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctg
tctgactacaacatccagaaagagtccactctgcacctggtcctccgtctcaggggtggt
atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt
gacaccattgagaatgtcaaggcaaagatccaggacaaagagggtatcccccctgaccag
cagaggttgatctttgcaggcaagcagctggaagatggccgcactctgtctgactacaac
atccagaaagagtccactctgcacctggtcctccgactcagaggtggtatgcagatcttt
gtgaagaccctgacaggcaagaccatcaccctggaggttgagcccagtgacaccattgag
aatgtcaaggcaaagatccaggacaaagagggtatcccccctgaccagcagaggttgatc
tttgcaggcaaacagctggaagatggccgcactctgtctgactacaacatccagaaagag
tccactctgcacctggtcctccgtctcaggggtggtatgcagatctttgtgaagaccctg
acaggcaagaccatcaccctggaggtcgagcccagtgacaccattgagaatgtcaaggca
aagatccaggacaaagagggtatcccccctgaccagcagaggctgatctttgcaggcaag
cagctggaagatggtcgcaccctgtctgactacaacatccagaaagagtccactctgcac
ctggtcctccgtctcaggggtggtatgcagatctttgtgaagaccctgacaggcaagacc
atcaccctggaggtcgagcccagtgacaccattgagaatgtcaaggcaaagatccaggac
aaagagggtatcccccctgaccagcagaggctgatctttgcaggcaagcagctggaagat
ggccgcactctgtctgactacaacatccagaaagagtccaccttgcacctggtcctccgt
ctcaggggtggtatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggag
gtcgagcccagtgccaccaagaaagtcaaacaggaagatggacgcacctttctcactaca
gtgtctagaaagagcactccttgtgcttgttcttgggcttga
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integrated database retrieval system
